CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_100000002
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_100000002
T139728_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_100000002
C2H2 ZF
14
36
HKCGKCDKEFHQLSDRKRHLHSH
fgenesh2_pm.scaffold_100000002
C2H2 ZF
42
64
LKCEDCGKQFSKLSQLKSHMRTH
fgenesh2_pm.scaffold_100000002
C2H2 ZF
70
92
YKCEECSKQFSELCNLKRHMRTH
fgenesh2_pm.scaffold_100000002
C2H2 ZF
98
120
YRCEECSKQFGELGSLESHVRIH
fgenesh2_pm.scaffold_100000002
C2H2 ZF
126
148
YKCEECSKQFSQLCNLKRHIKTH
fgenesh2_pm.scaffold_100000002
C2H2 ZF
154
176
YKCEECTKQFSELCSLKSHMRTH
fgenesh2_pm.scaffold_100000002
C2H2 ZF
182
204
YSCDECSKQFSQYTSLKRHMSTH
fgenesh2_pm.scaffold_100000002
C2H2 ZF
210
232
YRCEECNRQFCALSNLKSHMRTH
fgenesh2_pm.scaffold_100000002
C2H2 ZF
238
260
YKCEECSRQFSMLSYLKSHMRTH
fgenesh2_pm.scaffold_100000002
C2H2 ZF
266
288
YRCKECGKSFRTSSVLRRHKQTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found