CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_109000002
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_109000002
T139732_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_109000002
C2H2 ZF
1
22
MCGECGFRTTQKSNLVQHMRTH
fgenesh2_pm.scaffold_109000002
C2H2 ZF
51
73
YMCRECGYNTTKKDHLLRHMRTH
fgenesh2_pm.scaffold_109000002
C2H2 ZF
79
101
YKCDQCDYASAQKGDLDKHLARH
fgenesh2_pm.scaffold_109000002
C2H2 ZF
107
129
YMCGVCGYSTAKQDHLSVHIRTH
fgenesh2_pm.scaffold_109000002
C2H2 ZF
135
157
YTCDQCDYSAADKSRLVKHKRKH
fgenesh2_pm.scaffold_109000002
C2H2 ZF
163
185
YLCKECGYRSARKSDLSRHIRTH
fgenesh2_pm.scaffold_109000002
C2H2 ZF
219
241
YMCGECGYRAAQKSNLFQHMRTH
fgenesh2_pm.scaffold_109000002
C2H2 ZF
247
269
YKCDQCDYSTGRKFTLSQHMKTH
fgenesh2_pm.scaffold_109000002
C2H2 ZF
275
297
YKCKQCDYSAAHKSSLNRHVRKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found