CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_111000008
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_111000008
T139736_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_111000008
C2H2 ZF
10
32
FRCEECSRQFSELHHLKSHMRTH
fgenesh2_pm.scaffold_111000008
C2H2 ZF
38
60
YRCEECSKQFSGLGHLKTHMRTH
fgenesh2_pm.scaffold_111000008
C2H2 ZF
66
88
YTCESCSKQFSQLCHLKTHMRTH
fgenesh2_pm.scaffold_111000008
C2H2 ZF
94
116
YRCEECSRQFSRPSHLKVHMRTH
fgenesh2_pm.scaffold_111000008
C2H2 ZF
122
144
YRCEACSRQFSQPGHLKSHMRTH
fgenesh2_pm.scaffold_111000008
C2H2 ZF
150
172
YRCEECGRQFSELGHLKRHMRTH
fgenesh2_pm.scaffold_111000008
C2H2 ZF
178
200
YRCEECSRQFSRLEYLKSHMRTH
fgenesh2_pm.scaffold_111000008
C2H2 ZF
206
228
YKCEKCSRQFSQLGHLKSHMRTH
fgenesh2_pm.scaffold_111000008
C2H2 ZF
234
256
YRCEECSRQFSELGTLEKHMRTH
fgenesh2_pm.scaffold_111000008
C2H2 ZF
262
284
YRCEECSRQFSALDSLKSHIRTH
fgenesh2_pm.scaffold_111000008
C2H2 ZF
290
312
YTCEECSRQFSELGDLKRHMRTH
fgenesh2_pm.scaffold_111000008
C2H2 ZF
318
340
YRCNECSRQFSRLSHLERHMRTH
fgenesh2_pm.scaffold_111000008
C2H2 ZF
346
368
YMCEECSRQFSYPGHLKSHMQTH
fgenesh2_pm.scaffold_111000008
C2H2 ZF
374
396
YMCEECSKQFGQLSNLKSHMRTH
fgenesh2_pm.scaffold_111000008
C2H2 ZF
402
424
YTCEECSRQFSTLSNLKKHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found