CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_138000007
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_138000007
T139741_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_138000007
C2H2 ZF
10
32
YSCEKCSKEFLDRRHLNRHLLTH
fgenesh2_pm.scaffold_138000007
C2H2 ZF
38
60
FRCEVCSKQFCTRGNLKIHMRTH
fgenesh2_pm.scaffold_138000007
C2H2 ZF
66
88
YSCEECSKQFSDWSNMQKHKETH
fgenesh2_pm.scaffold_138000007
C2H2 ZF
94
116
YKCEECSSQFSTPSDLKKHMYTH
fgenesh2_pm.scaffold_138000007
C2H2 ZF
122
144
YKCEKCSKEFMDLKLLKQHKLTH
fgenesh2_pm.scaffold_138000007
C2H2 ZF
151
173
YRCEVCNKQLSDARNLKSHMRTH
fgenesh2_pm.scaffold_138000007
C2H2 ZF
179
201
YRCEVCSKQFIDSRSLNSHMRTH
fgenesh2_pm.scaffold_138000007
C2H2 ZF
207
229
YRCEVCSKQFSGKPHLRRHMQIH
fgenesh2_pm.scaffold_138000007
C2H2 ZF
235
257
YKCEECSSVFSVPSDLKKHMYAH
fgenesh2_pm.scaffold_138000007
C2H2 ZF
263
285
YSCEQCSKEFLKQKHLNQHLLTH
fgenesh2_pm.scaffold_138000007
C2H2 ZF
291
313
FRCEECSKQFCSRWNLEIHMRTH
fgenesh2_pm.scaffold_138000007
C2H2 ZF
324
345
YICEECKRKFKTPVDLKSHVCS
fgenesh2_pm.scaffold_138000007
C2H2 ZF
352
374
FRCEECSKQFSRLANLKRHKSTH
fgenesh2_pm.scaffold_138000007
C2H2 ZF
380
402
FVCEKCGSQFRLLDSLNVHLKTH
fgenesh2_pm.scaffold_138000007
C2H2 ZF
412
434
YSCETCQMQFYNQRHLNQHRMLH
fgenesh2_pm.scaffold_138000007
C2H2 ZF
440
462
YMCDKCSKQFHRKGDLACHMWNH
fgenesh2_pm.scaffold_138000007
C2H2 ZF
468
490
HKCEQCSKQFNKRSDLKRHMKSH
fgenesh2_pm.scaffold_138000007
C2H2 ZF
495
517
FVCEDCCKAFRKLGALKRHQRSH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found