CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_163000002
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_163000002
T139749_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_163000002
C2H2 ZF
33
55
YTCDDCGKRFSQQGHLEDHMSTH
fgenesh2_pm.scaffold_163000002
C2H2 ZF
61
83
YECEYCNKCFSQSSHLKAHVRTH
fgenesh2_pm.scaffold_163000002
C2H2 ZF
89
111
YRCEACCKQFSKLGTLKIHMRTH
fgenesh2_pm.scaffold_163000002
C2H2 ZF
117
139
YQCDECGKRFIQLCNLKDHMRTH
fgenesh2_pm.scaffold_163000002
C2H2 ZF
145
167
YECEYCNKCFTRSSHLKAHVRTH
fgenesh2_pm.scaffold_163000002
C2H2 ZF
173
195
YRCEACCKQFSVLSSLKKHMRTH
fgenesh2_pm.scaffold_163000002
C2H2 ZF
201
223
YICEACSKQFSELFTLKKHMRTH
fgenesh2_pm.scaffold_163000002
C2H2 ZF
229
251
YTCEECSKQFIELSSLKKHMRTH
fgenesh2_pm.scaffold_163000002
C2H2 ZF
257
279
YICEECSKQFSDPSDLKVHMRTH
fgenesh2_pm.scaffold_163000002
C2H2 ZF
285
307
YRCDKCSKQFTQFANLKRHIRIH
fgenesh2_pm.scaffold_163000002
C2H2 ZF
313
335
YTCEECGKQFIQFSHLKSHMRTH
fgenesh2_pm.scaffold_163000002
C2H2 ZF
341
363
YTCKECNKSYRHSRSLRAHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found