CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_182000004
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_182000004
T139757_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_182000004
C2H2 ZF
43
66
HRCDLCNYSTTYRAHLKRHIAAKH
fgenesh2_pm.scaffold_182000004
C2H2 ZF
72
94
HKCPTCDFAAVDKPSLKSHVAKH
fgenesh2_pm.scaffold_182000004
C2H2 ZF
100
122
YKCDFCGYSTTLMPNLKHHMAKH
fgenesh2_pm.scaffold_182000004
C2H2 ZF
128
150
YKCDTCGYGTALMSNLKRHMAKH
fgenesh2_pm.scaffold_182000004
C2H2 ZF
156
178
YNCDICGYRTAQMSNLKRHMAKH
fgenesh2_pm.scaffold_182000004
C2H2 ZF
184
207
YKCDICGYGTADMSNLKRHVMGKH
fgenesh2_pm.scaffold_182000004
C2H2 ZF
213
235
YKCGFCGYVTSRLFDLKKHTAKH
fgenesh2_pm.scaffold_182000004
C2H2 ZF
241
263
YNCELCGYGTVRMSYLKRHMAKH
fgenesh2_pm.scaffold_182000004
C2H2 ZF
269
291
YICDTCGYATSRMYTLKKHIATH
fgenesh2_pm.scaffold_182000004
C2H2 ZF
297
319
YKCEICGYATSRMSDLKKHTAIH
fgenesh2_pm.scaffold_182000004
C2H2 ZF
325
347
YKCDICGYSTAQMLHLKRHMETH
fgenesh2_pm.scaffold_182000004
C2H2 ZF
353
375
YKCEVCGYATSRISDLKKHIVIH
fgenesh2_pm.scaffold_182000004
C2H2 ZF
381
404
YKCDICGYNTAHVSSLKRHIMGQH
fgenesh2_pm.scaffold_182000004
C2H2 ZF
425
447
YKCEDCGYASSKMSDLKRHMAKH
fgenesh2_pm.scaffold_182000004
C2H2 ZF
453
475
YKCDICGYCTAQVTNFKRHMVKH
fgenesh2_pm.scaffold_182000004
C2H2 ZF
480
502
YKCDICGFGAAQRTHFKRHMAKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found