CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_183000010
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_183000010
T139759_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_183000010
C2H2 ZF
10
32
FKCDQCDYSAAQKSHLDRHLAKH
fgenesh2_pm.scaffold_183000010
C2H2 ZF
38
60
YMCGECGYRTVHKSALSKHMRSH
fgenesh2_pm.scaffold_183000010
C2H2 ZF
65
84
PYKCDQTAQKSHLSEHIRTH
fgenesh2_pm.scaffold_183000010
C2H2 ZF
90
112
YKCDQCGYSAALKSSLDQHLARH
fgenesh2_pm.scaffold_183000010
C2H2 ZF
118
140
YMCGECGYRAAQKADLAKHMRTH
fgenesh2_pm.scaffold_183000010
C2H2 ZF
146
168
YKCDQCGYSAALKSSLDQHLAKH
fgenesh2_pm.scaffold_183000010
C2H2 ZF
174
196
YMCGECGYRATKKCHLAEHMRTH
fgenesh2_pm.scaffold_183000010
C2H2 ZF
202
224
YKCDQCDYSAAQNSTLNQHLARH
fgenesh2_pm.scaffold_183000010
C2H2 ZF
230
252
YMCGECGYRATKKSNLARHMRTH
fgenesh2_pm.scaffold_183000010
C2H2 ZF
258
280
YKCDECDYSAAVKSALDRHCKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found