CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_183000027
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_183000027
T139764_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_183000027
C2H2 ZF
1
22
MCGECGYRAARKSHLSQHMRTH
fgenesh2_pm.scaffold_183000027
C2H2 ZF
28
50
YMCEECGYRVAYKSYLSRHMRTH
fgenesh2_pm.scaffold_183000027
C2H2 ZF
56
78
YKCDQCDYSAAKKYNLDQHLAKH
fgenesh2_pm.scaffold_183000027
C2H2 ZF
84
106
YMCGECGFRTTRKSDLVEHMRTH
fgenesh2_pm.scaffold_183000027
C2H2 ZF
112
134
YKCDQCDYSAAHKKSLNQHLAKH
fgenesh2_pm.scaffold_183000027
C2H2 ZF
140
162
YMCGECGYRTAKKAHLVEHMKTH
fgenesh2_pm.scaffold_183000027
C2H2 ZF
168
190
YKCDQCDYSAALKSNLKKHLAMH
fgenesh2_pm.scaffold_183000027
C2H2 ZF
196
218
YMCGECGYRTTQKCNLSLHMRTH
fgenesh2_pm.scaffold_183000027
C2H2 ZF
247
269
YMCGECGYRTVLKSTIARHMRTH
fgenesh2_pm.scaffold_183000027
C2H2 ZF
275
297
YKCDQCDYSAAEKSHLDSHLAKH
fgenesh2_pm.scaffold_183000027
C2H2 ZF
303
325
YMCGECGYRTAQKSNLSTHMRTH
fgenesh2_pm.scaffold_183000027
C2H2 ZF
331
353
YKCDQCDFSARRKNHLDQHLGKH
fgenesh2_pm.scaffold_183000027
C2H2 ZF
359
381
YMCGECGYRTTWKSDLATHMRTH
fgenesh2_pm.scaffold_183000027
C2H2 ZF
387
409
YKCDQCDYSATRKYHLDKHLAIH
fgenesh2_pm.scaffold_183000027
C2H2 ZF
415
437
YMCGECGYRTAQKCTLSQHMRKH
fgenesh2_pm.scaffold_183000027
C2H2 ZF
443
465
YKCDQCDFSAAQKSTLNNHVAMH
fgenesh2_pm.scaffold_183000027
C2H2 ZF
471
493
YMCGECGYRTVQKCNLSRHMRAH
fgenesh2_pm.scaffold_183000027
C2H2 ZF
499
521
YKCDQCDYSATKKSALDNHCKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found