CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_188000006
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_188000006
T139766_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_188000006
C2H2 ZF
30
52
HSCPHCEHETIDKTSMTIHIRTH
fgenesh2_pm.scaffold_188000006
C2H2 ZF
58
81
FQCPQCDYSAAQKGALKRHVMAVH
fgenesh2_pm.scaffold_188000006
C2H2 ZF
87
109
YHCGYCDYSAVQKISLEKHMAKH
fgenesh2_pm.scaffold_188000006
C2H2 ZF
124
146
HSCPHCEFETVSTTSLANHIRTH
fgenesh2_pm.scaffold_188000006
C2H2 ZF
152
175
FKCPQCDYSAAQKAQLKQHIQCKH
fgenesh2_pm.scaffold_188000006
C2H2 ZF
181
208
YHCGHCDFSAARKAKQSGHLKEHIMSKH
fgenesh2_pm.scaffold_188000006
C2H2 ZF
214
236
HKCTQCDFSSVSKKGLKLHMTTH
fgenesh2_pm.scaffold_188000006
C2H2 ZF
242
264
YRCEFCSYASRQKGQLKLHMAEH
fgenesh2_pm.scaffold_188000006
C2H2 ZF
270
292
FKCKVCDYCSASKSRLKTHMGTH
fgenesh2_pm.scaffold_188000006
C2H2 ZF
298
320
YKCELCDYTAVSMYRVKRHMVAH
fgenesh2_pm.scaffold_188000006
C2H2 ZF
326
348
FHCEHCNFSTARKEDLKRHTAKH
fgenesh2_pm.scaffold_188000006
C2H2 ZF
354
376
HKCELCDYSSWQSHHLKRHMITH
fgenesh2_pm.scaffold_188000006
C2H2 ZF
382
404
FKCEICGYGAREMYSLKAHMTRH
fgenesh2_pm.scaffold_188000006
C2H2 ZF
410
432
YQCEECDFSTATKAHLASHMTRH
fgenesh2_pm.scaffold_188000006
C2H2 ZF
438
460
YMCEVCGFAAAVKGGLRQHMAIH
fgenesh2_pm.scaffold_188000006
C2H2 ZF
466
488
YKCDQCDYTAAQKGHLNIHLANH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found