CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_19000003
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_19000003
T139767_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_19000003
C2H2 ZF
32
54
YRCEVCSKQFSELGNLTSHIRTH
fgenesh2_pm.scaffold_19000003
C2H2 ZF
60
82
YRCEECSRQFSQLSSLKKHMRTH
fgenesh2_pm.scaffold_19000003
C2H2 ZF
88
110
YRCEECSRQFSQLGDLKKHMRTH
fgenesh2_pm.scaffold_19000003
C2H2 ZF
116
138
YKCEECSRQFSRQSHLKTHMRTH
fgenesh2_pm.scaffold_19000003
C2H2 ZF
144
166
YRCEECSRQFSLLGDLKKHMRTH
fgenesh2_pm.scaffold_19000003
C2H2 ZF
172
194
YRCEECSKQFSRLDNLKTHMRTH
fgenesh2_pm.scaffold_19000003
C2H2 ZF
200
222
YKCEKCSRHFRTMSQLKNHIKTH
fgenesh2_pm.scaffold_19000003
C2H2 ZF
228
250
YRCDECSRQFRTPSHLKSHLWTH
fgenesh2_pm.scaffold_19000003
C2H2 ZF
256
278
YRCEECSKQFSQQSHLKTHMRTH
fgenesh2_pm.scaffold_19000003
C2H2 ZF
284
306
HKCEDCSRQFSQLSHLKRHMQTH
fgenesh2_pm.scaffold_19000003
C2H2 ZF
312
334
YMCEECSRQFSQLGGLKSHMLTH
fgenesh2_pm.scaffold_19000003
C2H2 ZF
340
362
YRCEECSRQFSKLGDLKRHMQTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found