CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pm.scaffold_204000009
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_204000009
T139774_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_204000009
C2H2 ZF
17
39
YKCKKCDFSSARKRSLAVHMSRH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
45
67
FMCGECEYRTAARSDLAKHMRTH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
73
95
HKCDQCDFASASKNRLKRHMFKH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
101
123
FQCGECGYRAIDRFDLSMHMKRH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
129
151
FKCDQCDFSSAWKRSLVRHMLVH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
157
179
YKCGECEYKTADRTHLSTHMRTH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
185
207
YKCDQCDYSAAQKVSLILHVSRH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
213
235
FMCGECQFRTADRYSLAKHRIKH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
241
263
YKCDQCDYSAARKQHLDRHMAVH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
269
291
YMCEKCGYMAAVRSSLSSHMRKH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
297
319
FQCDQCDYSAAQKAHLVQHLAKH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
325
347
YLCEQCGYRSASKSDLTVHLRKH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
353
375
YKCDLCDHSTTRKIYLNQHMATH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
381
403
YMCEVCGYGAVNKSRLSVHLRTH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
418
440
YNCDECDFSSSSKTSVKKHKAKH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
444
466
FMCGECGYRTVDKSSLCMHMKTH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
472
494
FKCGECGYRTAVRSRLSEHVRTH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
500
522
CKCDRCDFSSASKSGLNRHMIKH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
528
550
YMCGECGYRTADRSSLTVHMRKH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
556
578
YKCGQCNYVSARKDHLRKHMFKH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
584
606
FRCGECGYRTRDRSHLTRHMKTH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
612
634
FQCDQCDFSSVWKKSLDLHMARH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
640
662
FMCGECEYRTAVRSDLAKHMRKH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
668
690
HNCEQCDYSAAQKGLLNRHMAKH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
696
718
YKCDQCDFATAQKAHLYRHMTKH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
724
746
YACKECGFRTADRSTISRHMTIH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
752
774
YKCEQCDYSAAKKGQLDQHTAKH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
780
802
YLCEKCGFRTTNSFCLSSHMVTH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
808
830
YKCDQCDFAARQKSVLQRHKLRH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
836
858
YKCGECEYRTTTRSNLSAHTTKH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
864
886
YKCNQCDFASARKNDLNRHMTKH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
892
914
YACKECGFRMVDRSTLSRHMRTH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
973
995
YKCDICNYSAARKRSLAAHLRKH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
1001
1023
YKCDICDYSAARKSCLDQHMTKH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
1029
1051
YVCEECGYGTVKKSYLTIHLRKH
fgenesh2_pm.scaffold_204000009
C2H2 ZF
1057
1079
HKCDMCDYSAAHANSLKLHKKKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found