CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_204000011
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_204000011
T139775_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_204000011
C2H2 ZF
1
22
MCGECGYRTDNMRTLTVHMRKH
fgenesh2_pm.scaffold_204000011
C2H2 ZF
28
50
YACRDCEFRTAQKSSLSLHMRTH
fgenesh2_pm.scaffold_204000011
C2H2 ZF
85
107
YMCEECGYRTAHKSALSLHMRTH
fgenesh2_pm.scaffold_204000011
C2H2 ZF
113
135
YKCDQCDYLTVRQGDLKRHMAQH
fgenesh2_pm.scaffold_204000011
C2H2 ZF
141
163
YMCGECGFRTADRSHLVVHMRTH
fgenesh2_pm.scaffold_204000011
C2H2 ZF
169
191
YICEECGYRTAHKSSLSLHMRTH
fgenesh2_pm.scaffold_204000011
C2H2 ZF
197
219
YRCDQCDYSAAQKINLVRHMVKH
fgenesh2_pm.scaffold_204000011
C2H2 ZF
224
246
YQCDPCDYSAAQKITLNRHMAKH
fgenesh2_pm.scaffold_204000011
C2H2 ZF
285
307
YMCGECGFRTTLKSTLSKHMKKH
fgenesh2_pm.scaffold_204000011
C2H2 ZF
313
335
YKCDQCDYSSAFNASLNRHMAKH
fgenesh2_pm.scaffold_204000011
C2H2 ZF
341
363
YMCGECGYRTADRSTLTVHMRRH
fgenesh2_pm.scaffold_204000011
C2H2 ZF
369
390
YKCDQCSYSAAHKSSLHKHKAK
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found