CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pm.scaffold_226000002
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_226000002
T139777_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_226000002
C2H2 ZF
1
22
MCGECGYRAYRKCRLVEHMRTH
fgenesh2_pm.scaffold_226000002
C2H2 ZF
28
50
FKCNHCNYKTSFKQELSYHMKRH
fgenesh2_pm.scaffold_226000002
C2H2 ZF
56
78
YRCEICDYKTYRKPCIEKHIMCH
fgenesh2_pm.scaffold_226000002
C2H2 ZF
84
106
YKCKDCDYSTSNNSHLSRHRRRH
fgenesh2_pm.scaffold_226000002
C2H2 ZF
112
136
YSCQECDYKSVDKSNFVRHMRKKHH
fgenesh2_pm.scaffold_226000002
C2H2 ZF
166
188
FICSECGYRAHNKNRLVEHMRTH
fgenesh2_pm.scaffold_226000002
C2H2 ZF
194
216
FKCNHCNYKTSYKQELFYHMKKH
fgenesh2_pm.scaffold_226000002
C2H2 ZF
222
244
YRCKICDYQTHRKSNFETHMMRH
fgenesh2_pm.scaffold_226000002
C2H2 ZF
250
272
YKCKECDYRTAHKGDLIKHKRRH
fgenesh2_pm.scaffold_226000002
C2H2 ZF
278
304
YSCHECDYKATVKARYKYQLVGHMRTH
fgenesh2_pm.scaffold_226000002
C2H2 ZF
310
332
LECNQCNYNTSFKRNLVQHMKRH
fgenesh2_pm.scaffold_226000002
C2H2 ZF
338
360
YSCELCDYQTFRKSAIEKHIMGH
fgenesh2_pm.scaffold_226000002
C2H2 ZF
366
388
HKCEECDYSTVKKSDLIKHKRRH
fgenesh2_pm.scaffold_226000002
C2H2 ZF
443
465
YVCEVCGFNTTHARYLTKHAKRH
fgenesh2_pm.scaffold_226000002
C2H2 ZF
471
493
FLCGECGYRARYKYQLVEHMRTH
fgenesh2_pm.scaffold_226000002
C2H2 ZF
499
521
FKCKECDYRTAYKGDISKHMRCH
fgenesh2_pm.scaffold_226000002
C2H2 ZF
527
550
YSCQDCDYRTKVRSDLAKHMRHKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found