CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_252000013
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_252000013
T139780_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_252000013
C2H2 ZF
10
32
YTCEECSKQFIELSKLKKHMRTH
fgenesh2_pm.scaffold_252000013
C2H2 ZF
38
60
YLCEKCGKKFKLLDTLNTHMRTH
fgenesh2_pm.scaffold_252000013
C2H2 ZF
66
88
YKCNECSRQFSGMGNLKTHMRTH
fgenesh2_pm.scaffold_252000013
C2H2 ZF
108
130
YKCEQCSKQFSRPGHLKIHLRIH
fgenesh2_pm.scaffold_252000013
C2H2 ZF
136
158
YKCEECSKQFSMPGNLKSHMYTH
fgenesh2_pm.scaffold_252000013
C2H2 ZF
164
186
FKCEECSKQFSQLSDLKKHMRIH
fgenesh2_pm.scaffold_252000013
C2H2 ZF
192
214
YKCEECSKQFSQQQHLKEHMRTH
fgenesh2_pm.scaffold_252000013
C2H2 ZF
220
242
YRCEECSKQFNRPGHLKIHLRIH
fgenesh2_pm.scaffold_252000013
C2H2 ZF
248
270
YKCEECSKQFSQSGSLKTHMRTH
fgenesh2_pm.scaffold_252000013
C2H2 ZF
276
298
FTCEVCSKQFSSLSNMKSHQRSH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found