CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_281000003
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_281000003
T139785_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_281000003
C2H2 ZF
10
32
YKCEECSKQFSELGNLKRHMQTH
fgenesh2_pm.scaffold_281000003
C2H2 ZF
38
60
YRCEECSRQFSQLGNLDSHMRTH
fgenesh2_pm.scaffold_281000003
C2H2 ZF
66
88
YKCEECSKQFSRLDELKLHMQTH
fgenesh2_pm.scaffold_281000003
C2H2 ZF
109
131
YKCEECSKQFSDLGNLKRHMQTH
fgenesh2_pm.scaffold_281000003
C2H2 ZF
137
159
YRCEECSKQFSQLGHLKTHMRTH
fgenesh2_pm.scaffold_281000003
C2H2 ZF
165
187
YKCKECSKQFSRPDVLKRHMRTH
fgenesh2_pm.scaffold_281000003
C2H2 ZF
193
215
YKCERCSRQFSDMGNLKRHMRTH
fgenesh2_pm.scaffold_281000003
C2H2 ZF
227
249
YRCEECSRQFSKLSNLERHMRTH
fgenesh2_pm.scaffold_281000003
C2H2 ZF
255
277
FRCEECSRQFSELSNLERHMRTH
fgenesh2_pm.scaffold_281000003
C2H2 ZF
283
305
YRCEECSRQFSELSNLKKHMRTH
fgenesh2_pm.scaffold_281000003
C2H2 ZF
311
333
YRCEECSRQFSKLDHLKTHMRTH
fgenesh2_pm.scaffold_281000003
C2H2 ZF
339
361
YKCEECSQQFSRPDVLKSHMRTH
fgenesh2_pm.scaffold_281000003
C2H2 ZF
367
389
HRCEECSRQFSEMSTLKKHIQTH
fgenesh2_pm.scaffold_281000003
C2H2 ZF
392
412
CEECRKQFSELGALKTHMQTH
fgenesh2_pm.scaffold_281000003
C2H2 ZF
418
440
YKCEKCSRQFSQLCNLQTHMRTH
fgenesh2_pm.scaffold_281000003
C2H2 ZF
446
468
YKCVECNRQFSQLNSLKRHMRTH
fgenesh2_pm.scaffold_281000003
C2H2 ZF
474
496
YRCEECSRQFSDLGDLRKHIHTH
fgenesh2_pm.scaffold_281000003
C2H2 ZF
502
524
YRCEECSKQFSQLIDLKRHMRTH
fgenesh2_pm.scaffold_281000003
C2H2 ZF
530
552
YRCEECSKQFSQQSNLNRHMRTH
fgenesh2_pm.scaffold_281000003
C2H2 ZF
558
580
YSCEECSKQFSRLSNLKTHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found