CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_290000008
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_290000008
T139787_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_290000008
C2H2 ZF
10
32
YKCDQCNYSTVWKRYLDTHIANH
fgenesh2_pm.scaffold_290000008
C2H2 ZF
38
60
YMCGECGYRTAYRTNLSRHMKMH
fgenesh2_pm.scaffold_290000008
C2H2 ZF
66
88
YRCKQCDFSTSWQINLQRHMAQH
fgenesh2_pm.scaffold_290000008
C2H2 ZF
94
116
YKCDQCDYSAIQKSNLDKHLVKH
fgenesh2_pm.scaffold_290000008
C2H2 ZF
122
144
FVCELCGYGTAHKTHLARHMRKH
fgenesh2_pm.scaffold_290000008
C2H2 ZF
179
201
YKCDQCDYSAVRKGHLDKHLANH
fgenesh2_pm.scaffold_290000008
C2H2 ZF
207
229
YKCGVCGYRTAYKAHLLRHMRKH
fgenesh2_pm.scaffold_290000008
C2H2 ZF
235
257
YKCHQCDYFAAEKIYLDKHLVKH
fgenesh2_pm.scaffold_290000008
C2H2 ZF
263
285
FVCELCGYGTESKAHLSRHMKKH
fgenesh2_pm.scaffold_290000008
C2H2 ZF
291
313
YCCDHCDFSTSWKSSLDQHMAKH
fgenesh2_pm.scaffold_290000008
C2H2 ZF
319
341
FKCDQCDYSAVRKIYLDKHLANH
fgenesh2_pm.scaffold_290000008
C2H2 ZF
347
369
YKCGVCGYRTAYKAHLLRHMSKH
fgenesh2_pm.scaffold_290000008
C2H2 ZF
447
469
FNCDSCDFSTCSKTNLKQHMGKH
fgenesh2_pm.scaffold_290000008
C2H2 ZF
475
497
YLCGECGFRTAFRPSLSRHMKKH
fgenesh2_pm.scaffold_290000008
C2H2 ZF
503
525
HRCEHCGFCTARRDYMDHHMAIH
fgenesh2_pm.scaffold_290000008
C2H2 ZF
531
553
YRCDRCDFSTSWKSSLDQHRAKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found