CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_291000007
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_291000007
T139788_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_291000007
C2H2 ZF
23
45
FKCSHCDFATKTRPMLRQHMRIH
fgenesh2_pm.scaffold_291000007
C2H2 ZF
51
73
FSCKSCDFKTAHKKSLQTHMQTH
fgenesh2_pm.scaffold_291000007
C2H2 ZF
79
100
YMCEVCGHRTALAATLRTHMKF
fgenesh2_pm.scaffold_291000007
C2H2 ZF
112
134
YKCSLCDYTTRYASNLTRHNQVH
fgenesh2_pm.scaffold_291000007
C2H2 ZF
140
162
FKCAHCDYAGGSKKALKQHMSRH
fgenesh2_pm.scaffold_291000007
C2H2 ZF
170
190
CKECGFRTAYRTALDYHLKTH
fgenesh2_pm.scaffold_291000007
C2H2 ZF
196
218
FMCDKCGHRSANKASWRTHMKTH
fgenesh2_pm.scaffold_291000007
C2H2 ZF
223
245
LRCESCGYTASKPSYLAAHLRTH
fgenesh2_pm.scaffold_291000007
C2H2 ZF
251
273
LKCPDCDHEAVGRRELQLHMRTH
fgenesh2_pm.scaffold_291000007
C2H2 ZF
279
301
FACERCPYKSRYKSGLTNHLKTH
fgenesh2_pm.scaffold_291000007
C2H2 ZF
307
329
HKCEQCGYRAAQKATLYRHMRTH
fgenesh2_pm.scaffold_291000007
C2H2 ZF
335
357
YPCTVCGRSCATQYLLQTHMKSH
fgenesh2_pm.scaffold_291000007
C2H2 ZF
363
385
LVCKDCNYRTMHKADMNRHIRTH
fgenesh2_pm.scaffold_291000007
C2H2 ZF
391
413
YSCEECDYRATNKSALVFHTRIH
fgenesh2_pm.scaffold_291000007
C2H2 ZF
419
441
FRCQLCDYAAVRKDLLTAHLRRH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found