CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_292000003
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_292000003
T139789_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_292000003
C2H2 ZF
2
24
HKCGECDKEFHQLSDMKRHMRTH
fgenesh2_pm.scaffold_292000003
C2H2 ZF
30
52
FRCEDYSKRFSVLSNLKRHMRTH
fgenesh2_pm.scaffold_292000003
C2H2 ZF
58
80
YKCDKCSKQFSVQDHLKRHMKTH
fgenesh2_pm.scaffold_292000003
C2H2 ZF
86
108
YKCDECSERFSVLCNLKKHMKTH
fgenesh2_pm.scaffold_292000003
C2H2 ZF
114
136
YKCDECDRQFSQLGHLKIHMRTH
fgenesh2_pm.scaffold_292000003
C2H2 ZF
142
164
YTCEECCKQFSQLGSLKSHMRTH
fgenesh2_pm.scaffold_292000003
C2H2 ZF
198
220
YRCEECSRQFGGLGHLKSHIRTH
fgenesh2_pm.scaffold_292000003
C2H2 ZF
226
248
YRCTKCSRSFRISGHLRSHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found