CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_3000022
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_3000022
T139791_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_3000022
C2H2 ZF
10
32
FRCDQCNYSAAQKGSLDRHVRKH
fgenesh2_pm.scaffold_3000022
C2H2 ZF
38
60
FRCDKCEYRATERSTLTRHLRTH
fgenesh2_pm.scaffold_3000022
C2H2 ZF
66
88
YKCDYCDYSAAHKYNLTQHLAKH
fgenesh2_pm.scaffold_3000022
C2H2 ZF
94
116
FMCEECGFRTANRFTFSMHVRTH
fgenesh2_pm.scaffold_3000022
C2H2 ZF
122
144
YKCDRCEYSATQKSTLDRHLRRH
fgenesh2_pm.scaffold_3000022
C2H2 ZF
150
172
YMCWKCGYRTTEKSTLSNHMRTH
fgenesh2_pm.scaffold_3000022
C2H2 ZF
178
200
YKCDQCDYSTSFKSNLDQHEAKH
fgenesh2_pm.scaffold_3000022
C2H2 ZF
206
228
YMCEECGYRTAKKATLSLHMRSH
fgenesh2_pm.scaffold_3000022
C2H2 ZF
234
256
YKCDQCDYSAARKPSLDKHLRKH
fgenesh2_pm.scaffold_3000022
C2H2 ZF
262
284
FLCKECGHTTSHRSAFAIHMRTH
fgenesh2_pm.scaffold_3000022
C2H2 ZF
290
313
YKCDQCDYSATQKSNLLAHHIVKH
fgenesh2_pm.scaffold_3000022
C2H2 ZF
328
350
YKCDRCEYSATQKSTLDRHLRRH
fgenesh2_pm.scaffold_3000022
C2H2 ZF
356
378
YMCWKCGYRTTEKSTLSNHMRTH
fgenesh2_pm.scaffold_3000022
C2H2 ZF
384
406
YKCDQCDYSTSFKSNLDQHVAKH
fgenesh2_pm.scaffold_3000022
C2H2 ZF
412
434
YMCEECGYRTAKKATLSLHMRSH
fgenesh2_pm.scaffold_3000022
C2H2 ZF
440
462
YKCDQCDYSAARKPSLDKHLRKH
fgenesh2_pm.scaffold_3000022
C2H2 ZF
468
490
FLCKECGHRTSHRSAFAIHMRTH
fgenesh2_pm.scaffold_3000022
C2H2 ZF
496
519
YKCDQCDYSATQKSNLLAHHIVKH
fgenesh2_pm.scaffold_3000022
C2H2 ZF
525
547
YMCGECGYRTAQRPSLSHHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found