CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pm.scaffold_31000011
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_31000011
T139793_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_31000011
C2H2 ZF
10
32
YRCEECSRQFSQLGNLKAHVRTH
fgenesh2_pm.scaffold_31000011
C2H2 ZF
38
60
HRCEECSKQFSTASKLKSHLRTH
fgenesh2_pm.scaffold_31000011
C2H2 ZF
66
88
YKCEECSKQFSHLSDLKKHMRTH
fgenesh2_pm.scaffold_31000011
C2H2 ZF
94
116
YKCEECSKQFRELGYLKKHMRTH
fgenesh2_pm.scaffold_31000011
C2H2 ZF
122
144
YKCEECNRQFSQLSALKTHMRTH
fgenesh2_pm.scaffold_31000011
C2H2 ZF
150
172
YSCEECSRQFSTTSRLKIHLRTH
fgenesh2_pm.scaffold_31000011
C2H2 ZF
178
200
YKCEDCSRQFSQLSHLKRHMRTH
fgenesh2_pm.scaffold_31000011
C2H2 ZF
206
228
YSCEECCKQFGTTRNLKIHFRTH
fgenesh2_pm.scaffold_31000011
C2H2 ZF
234
256
YTCEECSRQFTTQGHLKSHMRTH
fgenesh2_pm.scaffold_31000011
C2H2 ZF
262
284
YTCEECSRQFSQLGHLKEHMRTH
fgenesh2_pm.scaffold_31000011
C2H2 ZF
290
312
YKCEACSRQFTQLTNLKKHMRTH
fgenesh2_pm.scaffold_31000011
C2H2 ZF
318
340
YRCEECSKQFSQLAHLKSHMRTH
fgenesh2_pm.scaffold_31000011
C2H2 ZF
346
368
YSCDKCSKQFSLLGGLKRHMRTH
fgenesh2_pm.scaffold_31000011
C2H2 ZF
374
396
YRCEECSRQFSRLDAMKSHMKKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found