CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_316000001
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_316000001
T139795_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_316000001
C2H2 ZF
1
22
MCEECGYRTARESHLSQHMRTH
fgenesh2_pm.scaffold_316000001
C2H2 ZF
28
50
FKCDQCDYSAAQKSSLDLHLARH
fgenesh2_pm.scaffold_316000001
C2H2 ZF
56
78
YMCGECGYRTAAKSHLSQHMRTH
fgenesh2_pm.scaffold_316000001
C2H2 ZF
96
118
YKCDQCDYSAAQKCHLDQHLARH
fgenesh2_pm.scaffold_316000001
C2H2 ZF
124
146
YMCGECGYRTAWKYALSLHLRTH
fgenesh2_pm.scaffold_316000001
C2H2 ZF
152
174
YKCDQCDYSAAQKNTLDLHLAKH
fgenesh2_pm.scaffold_316000001
C2H2 ZF
180
202
YMCAECGYRAAQKSALSQHMRTH
fgenesh2_pm.scaffold_316000001
C2H2 ZF
208
230
YKCDQCDYSTARKSHLDQHIAKH
fgenesh2_pm.scaffold_316000001
C2H2 ZF
236
258
YLCDECGYRTARKYSLFQHMRTH
fgenesh2_pm.scaffold_316000001
C2H2 ZF
264
286
YMCGECGYMAARKSLLSEHTRTH
fgenesh2_pm.scaffold_316000001
C2H2 ZF
292
314
YKCDQCDYSAARKSNLNQHLAMH
fgenesh2_pm.scaffold_316000001
C2H2 ZF
320
342
YMCGECGYRAMQKSTLTIHMRTH
fgenesh2_pm.scaffold_316000001
C2H2 ZF
358
380
YMCGECGYKTAKNSELSRHMRTH
fgenesh2_pm.scaffold_316000001
C2H2 ZF
386
408
YKCDQCDYSATRKYHLDQHQAIH
fgenesh2_pm.scaffold_316000001
C2H2 ZF
414
436
YMCGECGYRTAQKSTLSYHMRTH
fgenesh2_pm.scaffold_316000001
C2H2 ZF
442
464
YKCDHCDYSAAAKSTLDRHLAKH
fgenesh2_pm.scaffold_316000001
C2H2 ZF
470
492
YICGECGYRTARNSTLSIHLRTH
fgenesh2_pm.scaffold_316000001
C2H2 ZF
498
520
FKCDQCDYSAAMKSTFDRHLAKH
fgenesh2_pm.scaffold_316000001
C2H2 ZF
526
548
YMCGECGYRATQKSHLSKHMRTH
fgenesh2_pm.scaffold_316000001
C2H2 ZF
554
576
YKCNQCDYSAAQKSSLYQHQAKH
fgenesh2_pm.scaffold_316000001
C2H2 ZF
582
604
YMCGECGYRTAHTSHLSRHMRTH
fgenesh2_pm.scaffold_316000001
C2H2 ZF
610
632
YKCDQCDYSATTKGSLDYHLAQH
fgenesh2_pm.scaffold_316000001
C2H2 ZF
638
660
FMCGECGYRTAHKTDLVKHMRTH
fgenesh2_pm.scaffold_316000001
C2H2 ZF
666
688
YKCDQCDYSATKKSTLNNHCKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found