CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_34000007
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_34000007
T139802_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_34000007
C2H2 ZF
10
31
FKCDQCDYSAADKSTFNRHVQE
fgenesh2_pm.scaffold_34000007
C2H2 ZF
49
71
YICEECGYRADCKAHLFRHMRTH
fgenesh2_pm.scaffold_34000007
C2H2 ZF
77
99
YKCDQCDYSAALKSNLVNHIRKH
fgenesh2_pm.scaffold_34000007
C2H2 ZF
105
127
CMCGECGYRTILKSDLSRHLVTH
fgenesh2_pm.scaffold_34000007
C2H2 ZF
133
155
YKCDQCDYSAARKHNLDSHITQH
fgenesh2_pm.scaffold_34000007
C2H2 ZF
161
183
FTCGECGYRTAQRCKLSLHMKIH
fgenesh2_pm.scaffold_34000007
C2H2 ZF
189
211
YKCDQCDYSAAYKSNLDKHLRKH
fgenesh2_pm.scaffold_34000007
C2H2 ZF
217
239
YMCGDCGYRAVLKSDLSRHLRSH
fgenesh2_pm.scaffold_34000007
C2H2 ZF
245
267
YKCDQCDYSAAHKSNLDSHLRKH
fgenesh2_pm.scaffold_34000007
C2H2 ZF
273
295
YLCGECGYRAARKANLFLHMKTH
fgenesh2_pm.scaffold_34000007
C2H2 ZF
301
323
YKCDQCDYSAAQKSNLDQHQAKH
fgenesh2_pm.scaffold_34000007
C2H2 ZF
329
351
YMCGECGYRAARKSKLLVHMRTH
fgenesh2_pm.scaffold_34000007
C2H2 ZF
357
379
YKCEQCGYSAAQKSNLDEHVAKH
fgenesh2_pm.scaffold_34000007
C2H2 ZF
385
407
YICGECGYRAIRKSKLVIHMRTH
fgenesh2_pm.scaffold_34000007
C2H2 ZF
441
463
YRCDQCGYSATKKSNLVNHIRKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found