CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_34000010
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_34000010
T139805_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_34000010
C2H2 ZF
10
32
YKCDQCDYSAAHKSHLNRHLRKH
fgenesh2_pm.scaffold_34000010
C2H2 ZF
38
60
YMCGECGFRTAQRCTLSLHMKTH
fgenesh2_pm.scaffold_34000010
C2H2 ZF
66
88
YKCDQCEYAAAHKSNLDKHLRKH
fgenesh2_pm.scaffold_34000010
C2H2 ZF
117
139
YTCGECGYRSVQKSDLSKHMRTH
fgenesh2_pm.scaffold_34000010
C2H2 ZF
145
167
YKCGECGYRTAYKSDLSRHMRTH
fgenesh2_pm.scaffold_34000010
C2H2 ZF
173
195
YMCDQCDYSATEKSHLDRHLRKH
fgenesh2_pm.scaffold_34000010
C2H2 ZF
201
223
YKCDQCDYSATQKSKLVRHIRKH
fgenesh2_pm.scaffold_34000010
C2H2 ZF
229
251
YMCGECGYRAARKSHLSRHMRTH
fgenesh2_pm.scaffold_34000010
C2H2 ZF
257
279
YKCDQCDYSAADKSSLDQHFAKH
fgenesh2_pm.scaffold_34000010
C2H2 ZF
285
307
YMCEECGYRTAKKFELSKHMRTH
fgenesh2_pm.scaffold_34000010
C2H2 ZF
312
330
PYMCGESYKSDLSKHMRTH
fgenesh2_pm.scaffold_34000010
C2H2 ZF
336
358
YKCDQCDYSAADYTTLNNHQKKH
fgenesh2_pm.scaffold_34000010
C2H2 ZF
364
386
YMCGECGFRTTRKSILSAHVRTH
fgenesh2_pm.scaffold_34000010
C2H2 ZF
392
414
YKCDQCDYSAGQKRDLDKHVVKH
fgenesh2_pm.scaffold_34000010
C2H2 ZF
420
442
YMCGECGYRTARKSDLSKHMRSH
fgenesh2_pm.scaffold_34000010
C2H2 ZF
448
470
YKCDQCDYSAPQKNHLDLHLLKH
fgenesh2_pm.scaffold_34000010
C2H2 ZF
476
498
YMCGECGYRTALKTNLSRHMRTH
fgenesh2_pm.scaffold_34000010
C2H2 ZF
504
526
YKCDQCDYSAAQKDTLDAHVATH
fgenesh2_pm.scaffold_34000010
C2H2 ZF
532
554
YTCEECGHSTTTKSHLSRHMRTH
fgenesh2_pm.scaffold_34000010
C2H2 ZF
560
582
YKCDHCDYSAAVKSSLDQHLAKH
fgenesh2_pm.scaffold_34000010
C2H2 ZF
588
610
YMCEECGYRTARNFDLSKHMRTH
fgenesh2_pm.scaffold_34000010
C2H2 ZF
616
638
YKCDQCDYSAAQKQHLHSHLAKH
fgenesh2_pm.scaffold_34000010
C2H2 ZF
644
666
YMCGECGHRAARKSHLMVHMRTH
fgenesh2_pm.scaffold_34000010
C2H2 ZF
672
694
YKCDQCDYSTAQKGMLDQHLMEH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found