CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_34000014
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_34000014
T139808_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_34000014
C2H2 ZF
14
36
YICEECGYRADCKAHLFRHMRTH
fgenesh2_pm.scaffold_34000014
C2H2 ZF
42
64
YKCDQCDYSVAVKSNLVNHIRKH
fgenesh2_pm.scaffold_34000014
C2H2 ZF
70
92
YMCGECGYRTILKSDLSRHLRTH
fgenesh2_pm.scaffold_34000014
C2H2 ZF
98
120
YMCGECGFKAARKSYLSTHMRIH
fgenesh2_pm.scaffold_34000014
C2H2 ZF
126
148
YKCDQCDYSAAHKSSLEQHVAKH
fgenesh2_pm.scaffold_34000014
C2H2 ZF
154
176
YICGECGYRTAQKSDLATHMRTH
fgenesh2_pm.scaffold_34000014
C2H2 ZF
182
204
YQCDQCDYSAARKSNLDKHQRKH
fgenesh2_pm.scaffold_34000014
C2H2 ZF
210
232
YMCGECGYRTAHQCHLSRHMRTH
fgenesh2_pm.scaffold_34000014
C2H2 ZF
238
260
YTCDQCDYSAAQKGDLDKHLVKH
fgenesh2_pm.scaffold_34000014
C2H2 ZF
266
288
YMCGECGYRATQKSDLSKHMRIH
fgenesh2_pm.scaffold_34000014
C2H2 ZF
294
316
YKCDQCDYSATEKYTLAKHIRKH
fgenesh2_pm.scaffold_34000014
C2H2 ZF
322
344
YMCGECGYRATVKTNLSRHMRTH
fgenesh2_pm.scaffold_34000014
C2H2 ZF
350
372
YKCDQCDYSAIDKSNLKQHQVKH
fgenesh2_pm.scaffold_34000014
C2H2 ZF
378
400
YICGECGYGTVYRSHLSRHMRTH
fgenesh2_pm.scaffold_34000014
C2H2 ZF
406
428
YKCDQCDYSAAEKHHLIDHQTRH
fgenesh2_pm.scaffold_34000014
C2H2 ZF
434
456
YMCGECGFRTAHRSTLSIHMRIH
fgenesh2_pm.scaffold_34000014
C2H2 ZF
462
484
YKCDQCDYSAAEKSSLNRHVRKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found