CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_35000029
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_35000029
T139811_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_35000029
C2H2 ZF
18
40
YGCEECSRQFSRLGHLKTHVRTH
fgenesh2_pm.scaffold_35000029
C2H2 ZF
46
68
YKCEECSRQFSRLGQLKTHVRTH
fgenesh2_pm.scaffold_35000029
C2H2 ZF
74
96
YKCEECSRQFSHWVTLKTHMRTH
fgenesh2_pm.scaffold_35000029
C2H2 ZF
102
124
YRCEECSRQFSQLGNLMRHMHTH
fgenesh2_pm.scaffold_35000029
C2H2 ZF
130
152
YKCEECSKQFSQLSQLKRHMRTH
fgenesh2_pm.scaffold_35000029
C2H2 ZF
158
182
YRCEECSWQFSRLGHLKRHTHMQTH
fgenesh2_pm.scaffold_35000029
C2H2 ZF
188
210
YRCEECSRQFSRLRTLKTHMQTH
fgenesh2_pm.scaffold_35000029
C2H2 ZF
216
238
YRCEECSRQFSTLAHLKKHMRTH
fgenesh2_pm.scaffold_35000029
C2H2 ZF
244
266
YRCEECSRQFSELGNLKKHMRTH
fgenesh2_pm.scaffold_35000029
C2H2 ZF
272
294
YKCEECSRQFSHLDTLKTHMQTH
fgenesh2_pm.scaffold_35000029
C2H2 ZF
300
322
YRCEECNRQFSTLTHLKSHMRTH
fgenesh2_pm.scaffold_35000029
C2H2 ZF
328
350
YKCEECSRQFSQLGNLKTHVRTH
fgenesh2_pm.scaffold_35000029
C2H2 ZF
356
378
YRCEECSKQFSESGSLKRHVRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found