CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_354000006
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_354000006
T139813_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_354000006
C2H2 ZF
19
41
HKCGQCGKEFHKLNDLKRHVRTH
fgenesh2_pm.scaffold_354000006
C2H2 ZF
47
69
FRCEGCSRRFSVLGNLKRHMRTH
fgenesh2_pm.scaffold_354000006
C2H2 ZF
75
97
YKCDKCSKRFSEQGHLKRHRQTH
fgenesh2_pm.scaffold_354000006
C2H2 ZF
103
125
YKCEECGRQFSQFDHMKSHMRTH
fgenesh2_pm.scaffold_354000006
C2H2 ZF
131
153
YRCEECSKQFSRLGNLKRHMRTH
fgenesh2_pm.scaffold_354000006
C2H2 ZF
159
181
YRCDECSRQFSQQGNLKKHKMTH
fgenesh2_pm.scaffold_354000006
C2H2 ZF
187
209
YKCEECGRQFSQLDKLKTHMQTH
fgenesh2_pm.scaffold_354000006
C2H2 ZF
215
237
YKCEECSKQFSVLGSLKIHMRIH
fgenesh2_pm.scaffold_354000006
C2H2 ZF
243
265
YKCEKCSRHFSVLSNLKTHIKTH
fgenesh2_pm.scaffold_354000006
C2H2 ZF
271
293
YRCKECSRQFSRLGQLKSHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found