CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_354000010
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_354000010
T139814_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_354000010
C2H2 ZF
26
47
HKCGECGKEFRRLSNLKIHMRS
fgenesh2_pm.scaffold_354000010
C2H2 ZF
54
76
FRCEECGKQFSQLGNLKRHMRTH
fgenesh2_pm.scaffold_354000010
C2H2 ZF
82
104
YKCDKCSKQFSDQGSMKSHMRTH
fgenesh2_pm.scaffold_354000010
C2H2 ZF
110
132
FKCEECGRQFSQLDHVKKHIRTH
fgenesh2_pm.scaffold_354000010
C2H2 ZF
138
160
YKCEKCSKQFSQLCNLKRHTRTH
fgenesh2_pm.scaffold_354000010
C2H2 ZF
166
188
YRCDECSKQFSVMCNLKKHMRTH
fgenesh2_pm.scaffold_354000010
C2H2 ZF
194
216
YLCKECSRSFRTSSHLRSHMRTH
fgenesh2_pm.scaffold_354000010
C2H2 ZF
226
248
HKCCYCDKEFRFKSRLNLHLRTH
fgenesh2_pm.scaffold_354000010
C2H2 ZF
254
276
YRCEECSKQFSRLGTLKIHMITH
fgenesh2_pm.scaffold_354000010
C2H2 ZF
282
304
YRCEECSKQFRRLGTLKIHMHTH
fgenesh2_pm.scaffold_354000010
C2H2 ZF
310
332
YQCDDCGKRFCRKSNLEDHMRSH
fgenesh2_pm.scaffold_354000010
C2H2 ZF
338
360
YECEYCNKCFSKSVRLKTHMRTH
fgenesh2_pm.scaffold_354000010
C2H2 ZF
366
388
YRCEACCKQFSELSSLKKHMRTH
fgenesh2_pm.scaffold_354000010
C2H2 ZF
394
416
YRCEECSKQFSELCSLKKHMRTH
fgenesh2_pm.scaffold_354000010
C2H2 ZF
422
444
YICEECSKQFSILSGLKKHMRTH
fgenesh2_pm.scaffold_354000010
C2H2 ZF
450
472
YICEECSKQFRNSSHLKVHMRTH
fgenesh2_pm.scaffold_354000010
C2H2 ZF
478
500
YRCEKCGKQFTQFPNLKKHIRIH
fgenesh2_pm.scaffold_354000010
C2H2 ZF
506
528
YTCEKCDKQFIQLSHLKSHMRTH
fgenesh2_pm.scaffold_354000010
C2H2 ZF
534
557
YTCEKCSKSFRHSRSLRVHMKTHH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found