CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_369000001
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_369000001
T139816_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_369000001
C2H2 ZF
10
32
YKCDQCDYSAARKSNLDRHLAKH
fgenesh2_pm.scaffold_369000001
C2H2 ZF
38
60
YMCGECGYRTAKRSHLAEHVRTH
fgenesh2_pm.scaffold_369000001
C2H2 ZF
66
88
FKCDQCDYSASQKSALNQHLAIH
fgenesh2_pm.scaffold_369000001
C2H2 ZF
94
116
YMCGECGYRTVQKSHLAEHMRTH
fgenesh2_pm.scaffold_369000001
C2H2 ZF
122
144
YKCDQCDYSAARKCHLDQHLAKH
fgenesh2_pm.scaffold_369000001
C2H2 ZF
150
172
YMCGECGYRTAWKYALSLHMRTH
fgenesh2_pm.scaffold_369000001
C2H2 ZF
178
200
YKCDQCDYSAAQKNTLDQHLAKH
fgenesh2_pm.scaffold_369000001
C2H2 ZF
218
240
YMCGECGYRTARRSDLSIHLRTH
fgenesh2_pm.scaffold_369000001
C2H2 ZF
246
268
YKCDQCDYSAAQKSNLDSHLTKH
fgenesh2_pm.scaffold_369000001
C2H2 ZF
275
297
YMCGECGYRTTRKSHLAEHMRTH
fgenesh2_pm.scaffold_369000001
C2H2 ZF
303
325
YKCDQCDYSAAQKSALNRHLATH
fgenesh2_pm.scaffold_369000001
C2H2 ZF
331
353
YMCGECGYRAAQKSALSRHMRTH
fgenesh2_pm.scaffold_369000001
C2H2 ZF
359
381
YKCDQCDYSTARKSHLDQHIAKH
fgenesh2_pm.scaffold_369000001
C2H2 ZF
387
409
YLCDQCGYRTAQKYSLFQHMRTH
fgenesh2_pm.scaffold_369000001
C2H2 ZF
415
437
YKCDQCDYSAAQTSALNRHLASH
fgenesh2_pm.scaffold_369000001
C2H2 ZF
443
465
YMCGECGYRTAYKPTLSIHMRTH
fgenesh2_pm.scaffold_369000001
C2H2 ZF
471
493
YKCDQCDYSAARKDNLYQHLTVH
fgenesh2_pm.scaffold_369000001
C2H2 ZF
501
522
SGECGYRTAQKSNLSTHMRKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found