CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_407000001
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_407000001
T139820_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_407000001
C2H2 ZF
14
36
YMCGECGYRTARKSDLSQHMRIH
fgenesh2_pm.scaffold_407000001
C2H2 ZF
42
64
YKCDQCDYSASRKWSLEQHVARH
fgenesh2_pm.scaffold_407000001
C2H2 ZF
70
92
YMCGECGYRAAQKSDLSNHMRIH
fgenesh2_pm.scaffold_407000001
C2H2 ZF
98
120
YMCGECGYRTAKKSHLSRHMRTH
fgenesh2_pm.scaffold_407000001
C2H2 ZF
154
176
YMCGECGYRAAQKSDLSKHMRIH
fgenesh2_pm.scaffold_407000001
C2H2 ZF
182
204
YMCGECGYRTAKKSHLSRHTRTH
fgenesh2_pm.scaffold_407000001
C2H2 ZF
209
232
PCKFYQCDYSAAHKSSLEQHVAKH
fgenesh2_pm.scaffold_407000001
C2H2 ZF
238
260
HKCDQCDYSAARKSTFDKHLVKH
fgenesh2_pm.scaffold_407000001
C2H2 ZF
266
288
YMCGECGFRTAHQCYLSRHMRTH
fgenesh2_pm.scaffold_407000001
C2H2 ZF
294
316
YKCDQCNYSAAHKCDLDKHLVKH
fgenesh2_pm.scaffold_407000001
C2H2 ZF
322
344
YICGECGYRSSRKNDLSRHMRTH
fgenesh2_pm.scaffold_407000001
C2H2 ZF
350
372
YKCDQCYYSAADRTTLANHQRKH
fgenesh2_pm.scaffold_407000001
C2H2 ZF
378
400
YMCGECGFRTNRKFILSVHMRKH
fgenesh2_pm.scaffold_407000001
C2H2 ZF
406
428
YKCDQCNYSSAQKSNLEQHLSKH
fgenesh2_pm.scaffold_407000001
C2H2 ZF
434
456
YKCDQCDYSAAHKSHLDRHLRKH
fgenesh2_pm.scaffold_407000001
C2H2 ZF
462
484
YMCGECGYKAAQKAHLFLHMRTH
fgenesh2_pm.scaffold_407000001
C2H2 ZF
490
512
YKCDQCDYSAAQKSNLDQHLANH
fgenesh2_pm.scaffold_407000001
C2H2 ZF
518
540
YMCGECGYRTAHQCHLSRHMRVH
fgenesh2_pm.scaffold_407000001
C2H2 ZF
546
568
YKCDQCDYSAARKSHLNRHLRKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found