CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_435000002
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_435000002
T139824_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_435000002
C2H2 ZF
10
32
YRCGECRYRTAKRSNLLVHMRTH
fgenesh2_pm.scaffold_435000002
C2H2 ZF
38
61
YKCDQCDYSAAYKTALDKHLRAKH
fgenesh2_pm.scaffold_435000002
C2H2 ZF
67
89
YMCGECGYKTAQKSTLTRHMRTH
fgenesh2_pm.scaffold_435000002
C2H2 ZF
95
117
YMCDECGYRTAQKSHLSEHMKTH
fgenesh2_pm.scaffold_435000002
C2H2 ZF
123
145
YKCDQCDYSAAHKISLDQHLAKH
fgenesh2_pm.scaffold_435000002
C2H2 ZF
151
173
YLCEHCGYKTTKHSHLSRHLRTH
fgenesh2_pm.scaffold_435000002
C2H2 ZF
179
201
YKCDQCNYSAAQKTALELHMAKH
fgenesh2_pm.scaffold_435000002
C2H2 ZF
208
228
MCQCGYRTARKYNLSSHMKTH
fgenesh2_pm.scaffold_435000002
C2H2 ZF
234
256
YMCGECGYRAANKSHISQHMKTH
fgenesh2_pm.scaffold_435000002
C2H2 ZF
262
284
YMCGECGYRTARKAVLSRHVRTH
fgenesh2_pm.scaffold_435000002
C2H2 ZF
290
312
YKCDQCDYSAAQKTALELHMAKH
fgenesh2_pm.scaffold_435000002
C2H2 ZF
318
340
YMCGICGYRAAIKSHLIQHMRTH
fgenesh2_pm.scaffold_435000002
C2H2 ZF
346
369
YKCDQCEYSAAQKPSLDRHYQAKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found