CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_48000004
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_48000004
T139829_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_48000004
C2H2 ZF
1
22
MCGECGYRTQYKYHLDEHMRKH
fgenesh2_pm.scaffold_48000004
C2H2 ZF
28
50
FKCNKCHYKTSYKSYLVQHMICH
fgenesh2_pm.scaffold_48000004
C2H2 ZF
56
78
YKCKECVYRTAYKGDLIKHMRLH
fgenesh2_pm.scaffold_48000004
C2H2 ZF
84
107
YSCQVECGYRAHNKNRLVEHMRTH
fgenesh2_pm.scaffold_48000004
C2H2 ZF
113
135
FKCNHCNYKTSYKQELFYHMKTH
fgenesh2_pm.scaffold_48000004
C2H2 ZF
141
163
YRCKICDYQTHRKSNFETHMMRH
fgenesh2_pm.scaffold_48000004
C2H2 ZF
169
191
YKCKECDYRTAHKGDLIKHKRRH
fgenesh2_pm.scaffold_48000004
C2H2 ZF
218
240
FMCGECGYRARYKYQLVGHMRTH
fgenesh2_pm.scaffold_48000004
C2H2 ZF
246
268
LECNQCNYNTSFKRNLVQHMKRH
fgenesh2_pm.scaffold_48000004
C2H2 ZF
274
296
YSCELCDYQTFRKSAIEKHIMGH
fgenesh2_pm.scaffold_48000004
C2H2 ZF
302
324
HKCEECDYSTVKKSDLIKHKRRH
fgenesh2_pm.scaffold_48000004
C2H2 ZF
336
358
YVCEVCGFNTTHARYLTKHAKRH
fgenesh2_pm.scaffold_48000004
C2H2 ZF
364
386
FLCGECGYRARYKYQLVEHMRTH
fgenesh2_pm.scaffold_48000004
C2H2 ZF
392
414
FRCKECDYRTAYKGDISKHMRCH
fgenesh2_pm.scaffold_48000004
C2H2 ZF
420
443
YSCQDCDYRTKVRSDLAKHMRHKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found