CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_482000001
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_482000001
T139831_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_482000001
C2H2 ZF
10
32
YKCDQCDYSAAQKRSLDQHLAKH
fgenesh2_pm.scaffold_482000001
C2H2 ZF
66
88
YKCDQCDYSATYKSNLNKHLAMH
fgenesh2_pm.scaffold_482000001
C2H2 ZF
94
116
YMCGECGYRAAHKSHLSQHMRTH
fgenesh2_pm.scaffold_482000001
C2H2 ZF
139
161
YMCGECGYRAAHKSTLSRHMRTH
fgenesh2_pm.scaffold_482000001
C2H2 ZF
167
189
YKCDQCDFAAAKKSDLRYHRTKH
fgenesh2_pm.scaffold_482000001
C2H2 ZF
195
217
FMCGECGYRTARKCHFFEHMRTH
fgenesh2_pm.scaffold_482000001
C2H2 ZF
223
245
YKCDKCDYSAAVKATLNQHLKQH
fgenesh2_pm.scaffold_482000001
C2H2 ZF
251
273
YMCGECGYRATNRCNLSGHMRTH
fgenesh2_pm.scaffold_482000001
C2H2 ZF
279
301
YKCDQCDYSAALKSSLKKHQLIH
fgenesh2_pm.scaffold_482000001
C2H2 ZF
307
329
YMCGECGYRATQRSVLSNHMRTH
fgenesh2_pm.scaffold_482000001
C2H2 ZF
335
356
FKCDQCDYSAARKCTLRRHLRQ
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found