CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_55000004
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_55000004
T139836_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_55000004
C2H2 ZF
10
32
YKCEECRRQFSQLGHLKTHIRTH
fgenesh2_pm.scaffold_55000004
C2H2 ZF
38
60
YKCEECSRQFSELGTLKKHMRSH
fgenesh2_pm.scaffold_55000004
C2H2 ZF
66
88
YRCEECSRQFTELCTLNKHMRTH
fgenesh2_pm.scaffold_55000004
C2H2 ZF
94
116
YECEECSRPFSELGALKRHMRTH
fgenesh2_pm.scaffold_55000004
C2H2 ZF
122
144
YSCEECSKRFSELGHLKKHIRSH
fgenesh2_pm.scaffold_55000004
C2H2 ZF
150
172
YSCEECSSQFSDFSNLRRHMRTH
fgenesh2_pm.scaffold_55000004
C2H2 ZF
178
200
FRCEECSRLFGDLGNLKRHIQTH
fgenesh2_pm.scaffold_55000004
C2H2 ZF
208
230
YRCEECSKQFSQLCNLKTHMRAH
fgenesh2_pm.scaffold_55000004
C2H2 ZF
236
258
YRCEECSKQFSQLGHLKAHIQTH
fgenesh2_pm.scaffold_55000004
C2H2 ZF
264
286
YRCEECSSQFSHLGNLKTHMRTH
fgenesh2_pm.scaffold_55000004
C2H2 ZF
292
314
YKCEDCSRQFSRLGNLKTHMFTH
fgenesh2_pm.scaffold_55000004
C2H2 ZF
320
342
YRCEECSRQFSQLVVLKKHMRTH
fgenesh2_pm.scaffold_55000004
C2H2 ZF
348
370
YRCEECSKQFSRQGDLKTHMRTH
fgenesh2_pm.scaffold_55000004
C2H2 ZF
376
398
YMCEECSKQFSQLGHLRTHMRTH
fgenesh2_pm.scaffold_55000004
C2H2 ZF
404
426
YRCEECSRQFRHLCDLKAHMRTH
fgenesh2_pm.scaffold_55000004
C2H2 ZF
432
454
YTCEECSKKFTQLSNLKRHMQTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found