CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_55000017
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_55000017
T139839_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_55000017
C2H2 ZF
3
22
GECGYRTAYNSNLFQHMRTH
fgenesh2_pm.scaffold_55000017
C2H2 ZF
28
50
YRCDQCDYSTAKKCNLDQHLAKH
fgenesh2_pm.scaffold_55000017
C2H2 ZF
56
78
YMCGECEYRAAQKSTLSRHMRTH
fgenesh2_pm.scaffold_55000017
C2H2 ZF
84
106
YKCDQCDYSTARKSTLDRHLAKH
fgenesh2_pm.scaffold_55000017
C2H2 ZF
112
134
YMCGECGYRAAQKSDLSKHMRTH
fgenesh2_pm.scaffold_55000017
C2H2 ZF
168
190
YMCGDCGYMTTRNPDLVKHMRTH
fgenesh2_pm.scaffold_55000017
C2H2 ZF
224
246
YMCGDCGYMTTRNPDLVKHMRTH
fgenesh2_pm.scaffold_55000017
C2H2 ZF
252
274
YKCDQCDYSAARKSTLCQHIASH
fgenesh2_pm.scaffold_55000017
C2H2 ZF
280
302
YMCGECGYRTAYKSDLSQHMRTH
fgenesh2_pm.scaffold_55000017
C2H2 ZF
342
364
FKCDQCDYSTTQKSNLNQHLAMH
fgenesh2_pm.scaffold_55000017
C2H2 ZF
370
392
YMCGECGYRTSWKSALSQHVRRH
fgenesh2_pm.scaffold_55000017
C2H2 ZF
398
420
FKCDQCDYSTAQKYSLDLHLIKH
fgenesh2_pm.scaffold_55000017
C2H2 ZF
426
448
YKCGECGYRTAQKYALSQHMRTH
fgenesh2_pm.scaffold_55000017
C2H2 ZF
454
476
YKCDHCDYSAAVKSTLDRHLAIH
fgenesh2_pm.scaffold_55000017
C2H2 ZF
482
504
YMCGECGYRTAQKYALSQHMRTH
fgenesh2_pm.scaffold_55000017
C2H2 ZF
510
532
YKCDQCDYSAAVKCSLDLHLAKH
fgenesh2_pm.scaffold_55000017
C2H2 ZF
538
560
HMCGECGYRTTKKSHLADHMRTH
fgenesh2_pm.scaffold_55000017
C2H2 ZF
566
588
YKCDQCDYSAAHKSTLNQHLARH
fgenesh2_pm.scaffold_55000017
C2H2 ZF
594
610
YMCGECGYRTTRKSQLS
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found