CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_574000003
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_574000003
T139841_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_574000003
C2H2 ZF
1
22
MCTECGYRTTTKARLSRHLRIH
fgenesh2_pm.scaffold_574000003
C2H2 ZF
28
50
YKCDQCDYSAAQKSTLDQHRTKH
fgenesh2_pm.scaffold_574000003
C2H2 ZF
56
78
YMCGECGYRSAQMSTLYQHIRTH
fgenesh2_pm.scaffold_574000003
C2H2 ZF
84
106
YKCDLCDYSAASKSNLNKHLAKH
fgenesh2_pm.scaffold_574000003
C2H2 ZF
112
134
YMCGECGFRTAQTSRLSAHMRIH
fgenesh2_pm.scaffold_574000003
C2H2 ZF
184
206
YMCGECGYRTAHRSYISQHMRIH
fgenesh2_pm.scaffold_574000003
C2H2 ZF
212
234
YKCDQCNFSASQKNNLVTHQATH
fgenesh2_pm.scaffold_574000003
C2H2 ZF
240
262
YMCGECGYRAAQRSNLSQHMRNH
fgenesh2_pm.scaffold_574000003
C2H2 ZF
268
290
YKCKQCDYSTAWKSNLNHHVKKH
fgenesh2_pm.scaffold_574000003
C2H2 ZF
296
319
YKCDQCDYSTAGKGNLTRHVRTKH
fgenesh2_pm.scaffold_574000003
C2H2 ZF
325
347
YMCGECGYRATQKSHLSQHMRTH
fgenesh2_pm.scaffold_574000003
C2H2 ZF
353
375
YKCDQCDYSAAQKSHLNQHLTTH
fgenesh2_pm.scaffold_574000003
C2H2 ZF
381
403
YQCGDCGYRTGKKSDLSGHMRTH
fgenesh2_pm.scaffold_574000003
C2H2 ZF
409
431
HNCDHCDYSTAYKASLSRHMRTH
fgenesh2_pm.scaffold_574000003
C2H2 ZF
460
482
YMCGECGYRTAQRSNLSIHMRIH
fgenesh2_pm.scaffold_574000003
C2H2 ZF
488
510
YKCDLCDYSAAQKPTLDRHTASH
fgenesh2_pm.scaffold_574000003
C2H2 ZF
516
538
YTCWKCGYETTERSRLTRHMRSH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found