CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_59000012
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_59000012
T139844_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_59000012
C2H2 ZF
1
22
MCEECGKQFSKLAYLKKHKRTH
fgenesh2_pm.scaffold_59000012
C2H2 ZF
28
50
YRCEECGKQFSQLAHLKVHMRTH
fgenesh2_pm.scaffold_59000012
C2H2 ZF
56
78
YKCEECSKQFSRLDHLKEHMRTH
fgenesh2_pm.scaffold_59000012
C2H2 ZF
84
106
YRCEECSRQFSELSDLKKHIRTH
fgenesh2_pm.scaffold_59000012
C2H2 ZF
112
134
YKCEDCSRQFSQLSNLKTHMKTH
fgenesh2_pm.scaffold_59000012
C2H2 ZF
140
162
YKCEECSRQFSRLGNLKNHIKTH
fgenesh2_pm.scaffold_59000012
C2H2 ZF
168
190
YRCEECSKQFSRLHHLKGHMQTH
fgenesh2_pm.scaffold_59000012
C2H2 ZF
196
218
YRCEECSGQFSQLGHLKRHMQTH
fgenesh2_pm.scaffold_59000012
C2H2 ZF
224
246
YKCEECSKLFSRPDELKKHMQTH
fgenesh2_pm.scaffold_59000012
C2H2 ZF
252
274
YRCEECSTHFSQLGHLKGHMRTH
fgenesh2_pm.scaffold_59000012
C2H2 ZF
280
302
YKCEECSRQFSRLGHLKEHMQTH
fgenesh2_pm.scaffold_59000012
C2H2 ZF
308
330
YKCEECSRQFSRLGHLKGHMRTH
fgenesh2_pm.scaffold_59000012
C2H2 ZF
336
358
YRCEECCRQFSELGTLKTHMRTH
fgenesh2_pm.scaffold_59000012
C2H2 ZF
364
386
YKCEECSKQFSRLRVLRKHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found