CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_614000001
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_614000001
T139845_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_614000001
C2H2 ZF
10
32
YKCEECCKQFSQLGHLKTHMRTH
fgenesh2_pm.scaffold_614000001
C2H2 ZF
38
60
YKCEECDKQFSELGSLEKHMRTH
fgenesh2_pm.scaffold_614000001
C2H2 ZF
66
88
YKCEECCKQFSELGSLKKHMRTH
fgenesh2_pm.scaffold_614000001
C2H2 ZF
94
116
YRCEECDRQFSELGSLKKHMRTH
fgenesh2_pm.scaffold_614000001
C2H2 ZF
122
144
YKCEECCKQFSQLGHLKTHMRTH
fgenesh2_pm.scaffold_614000001
C2H2 ZF
150
172
YKCEECSRQFSELGSLKKHMRTH
fgenesh2_pm.scaffold_614000001
C2H2 ZF
178
200
YKCEECCKQFSQLGHLKTHMRTH
fgenesh2_pm.scaffold_614000001
C2H2 ZF
206
228
YKCEECDKQFSELGSLEKHMRTH
fgenesh2_pm.scaffold_614000001
C2H2 ZF
234
259
YKCEECEECNKQFSQLSHLRTHMVTH
fgenesh2_pm.scaffold_614000001
C2H2 ZF
265
287
YRCEECSKQFSQLSQLKSHMRAH
fgenesh2_pm.scaffold_614000001
C2H2 ZF
293
315
YKCEECSRQFKRLDYLRSHRRTH
fgenesh2_pm.scaffold_614000001
C2H2 ZF
321
343
YRCEECSRQLSGLGNLKTHMRTH
fgenesh2_pm.scaffold_614000001
C2H2 ZF
349
371
YRCEECNKQFSTQGSLKIHIRTH
fgenesh2_pm.scaffold_614000001
C2H2 ZF
377
399
YKCEEYSKQFSQLSFLDYHMRTH
fgenesh2_pm.scaffold_614000001
C2H2 ZF
405
427
YKCGQCSRQFSQLSNLKTHMRTH
fgenesh2_pm.scaffold_614000001
C2H2 ZF
433
455
YNCEECSRQFSKMDHLKKHMRTH
fgenesh2_pm.scaffold_614000001
C2H2 ZF
461
483
YTCEECSRQFSQLISLKTHMRTH
fgenesh2_pm.scaffold_614000001
C2H2 ZF
489
511
FKCEKCSKQFSELGNLKTHMRTH
fgenesh2_pm.scaffold_614000001
C2H2 ZF
517
539
YTCEECSRQFSQLGSLKTHMSTH
fgenesh2_pm.scaffold_614000001
C2H2 ZF
545
567
YRCEECSKQFSQLGNLKTHMVTH
fgenesh2_pm.scaffold_614000001
C2H2 ZF
575
595
REECSRQFSQLGNLKRHMETH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found