CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pm.scaffold_64000015
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_64000015
T139849_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_64000015
C2H2 ZF
1
22
MCGECGYRTAKKSHLSNHMRTH
fgenesh2_pm.scaffold_64000015
C2H2 ZF
28
50
YKCDQCDYSAAQKNNLDQHLAKH
fgenesh2_pm.scaffold_64000015
C2H2 ZF
56
78
YMCGECGYRTTQKSTLSQHMRTH
fgenesh2_pm.scaffold_64000015
C2H2 ZF
84
106
YKCDQCDYSAAQKSSLNQHLAKH
fgenesh2_pm.scaffold_64000015
C2H2 ZF
112
134
YICGECGYSTTKRSHLAKHMRTH
fgenesh2_pm.scaffold_64000015
C2H2 ZF
164
186
YKCDHCDYSATRKSNLDRHLAQH
fgenesh2_pm.scaffold_64000015
C2H2 ZF
192
214
YKCDQCDYSAEQKSHLDQHLARH
fgenesh2_pm.scaffold_64000015
C2H2 ZF
220
242
YICVECGYMTDRKPGLSRHMRTH
fgenesh2_pm.scaffold_64000015
C2H2 ZF
248
270
YKCDQCDYSAAQRSSLEHHLAKH
fgenesh2_pm.scaffold_64000015
C2H2 ZF
276
298
YMCGECGYRTSKKSHLSDHMRIH
fgenesh2_pm.scaffold_64000015
C2H2 ZF
304
326
YKCDLCDFSAAKKSNLDQHLAKH
fgenesh2_pm.scaffold_64000015
C2H2 ZF
332
354
YMCGKCGYMTDRNSDLSRHMRTH
fgenesh2_pm.scaffold_64000015
C2H2 ZF
360
382
YKCDQCDYSAAQKSSLNQHVAKH
fgenesh2_pm.scaffold_64000015
C2H2 ZF
388
410
YMCGECGYRSTRKFDLVRHTRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found