CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_7000010
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_7000010
T139857_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_7000010
C2H2 ZF
10
32
YQCEECNRQFSRQSDLKTHVRTH
fgenesh2_pm.scaffold_7000010
C2H2 ZF
38
60
FKCEECNRKFSRLDSLKKHLRTH
fgenesh2_pm.scaffold_7000010
C2H2 ZF
66
88
YRCKECSKQFSQLGDLKRHMLTH
fgenesh2_pm.scaffold_7000010
C2H2 ZF
94
116
YKCEECSRQFSVLNSLKSHMRTH
fgenesh2_pm.scaffold_7000010
C2H2 ZF
122
144
YSCEECSRQFSYPGSLERHKRTH
fgenesh2_pm.scaffold_7000010
C2H2 ZF
150
172
YRCEVCSRQFGESGALTKHMRTH
fgenesh2_pm.scaffold_7000010
C2H2 ZF
178
200
YMCEECSKQFSELVNLKRHMRTH
fgenesh2_pm.scaffold_7000010
C2H2 ZF
206
228
YRCEECSKQFSQPGELKTHMRTH
fgenesh2_pm.scaffold_7000010
C2H2 ZF
234
256
YTCEECSKQFSRLDSLKKHMRTH
fgenesh2_pm.scaffold_7000010
C2H2 ZF
268
290
YKCEECSRQFSQLSNLKAHMRTH
fgenesh2_pm.scaffold_7000010
C2H2 ZF
296
318
YRCEECSKQFSQPGHLKEHMRTH
fgenesh2_pm.scaffold_7000010
C2H2 ZF
324
346
YKCEECSRQFSQFCNLKKHMRTH
fgenesh2_pm.scaffold_7000010
C2H2 ZF
352
374
YRCEECSRQFSRLDELRKHMHTH
fgenesh2_pm.scaffold_7000010
C2H2 ZF
380
402
YRCEECSRQFSQLGHLKTHMRTH
fgenesh2_pm.scaffold_7000010
C2H2 ZF
409
425
SKQFCQQGPLKKHMRTH
fgenesh2_pm.scaffold_7000010
C2H2 ZF
431
453
YKCEDCSKQFSQKSNLKSHMRTH
fgenesh2_pm.scaffold_7000010
C2H2 ZF
459
481
YKCEDCSKQFSQKSNLKSHMRTH
fgenesh2_pm.scaffold_7000010
C2H2 ZF
487
509
YRCEECSRQFSELGSLTKHMRTH
fgenesh2_pm.scaffold_7000010
C2H2 ZF
515
537
YKCEECNKQFSHLGHLKTHMRTH
fgenesh2_pm.scaffold_7000010
C2H2 ZF
543
565
YRCEKCSRQFSELGNLKAHVRTH
fgenesh2_pm.scaffold_7000010
C2H2 ZF
571
593
YRCDECSRQFGVLGDLKKHMRTH
fgenesh2_pm.scaffold_7000010
C2H2 ZF
599
621
YGCEACSRQFSRLDYLKKHLRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found