CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_800000002
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_800000002
T139860_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_800000002
C2H2 ZF
10
32
YSCEQCSKQFSDLSTLKKHMRTH
fgenesh2_pm.scaffold_800000002
C2H2 ZF
38
60
YKCAVCSRRFTTSGHLKTHKRTH
fgenesh2_pm.scaffold_800000002
C2H2 ZF
66
88
YSCEQCSKQFSELSTLKTHMRTH
fgenesh2_pm.scaffold_800000002
C2H2 ZF
94
116
YRCAECSKQFSDLSTLKAHMRTH
fgenesh2_pm.scaffold_800000002
C2H2 ZF
122
144
YKCAVCSRRFTTSGHLKSHMRSH
fgenesh2_pm.scaffold_800000002
C2H2 ZF
150
172
YNCEQCSKQFSHLSTLKTHMRTH
fgenesh2_pm.scaffold_800000002
C2H2 ZF
178
200
YRCEECGKQCRELGNLRTHMRTH
fgenesh2_pm.scaffold_800000002
C2H2 ZF
206
228
YGCDVCNRRYRTQSHLKTHKRTH
fgenesh2_pm.scaffold_800000002
C2H2 ZF
234
256
YCCNVCSMSFGYQNALKSHMRTH
fgenesh2_pm.scaffold_800000002
C2H2 ZF
262
284
YNCEECGRQFRELSNLKVHMRTH
fgenesh2_pm.scaffold_800000002
C2H2 ZF
290
312
YRCEECSRQFRRYDDLKLHIRTH
fgenesh2_pm.scaffold_800000002
C2H2 ZF
318
340
YKCKECSKQFSRLGDLKTHMRTH
fgenesh2_pm.scaffold_800000002
C2H2 ZF
346
368
YKCEKCSRQFRQLNQLKAHMRTH
fgenesh2_pm.scaffold_800000002
C2H2 ZF
374
396
YRCEECSRQFRQLQHLKKHIQVH
fgenesh2_pm.scaffold_800000002
C2H2 ZF
402
424
HKCDVCNKRCSTISNLKIHKRTH
fgenesh2_pm.scaffold_800000002
C2H2 ZF
430
452
YCCDMCSKSFSHQNSLKTHMRTH
fgenesh2_pm.scaffold_800000002
C2H2 ZF
458
480
YKCEKCSKQFRQLPCLQNHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found