CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_81000012
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_81000012
T139863_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_81000012
C2H2 ZF
32
54
YKCEKCSRQFKQLGNLRTHMRTH
fgenesh2_pm.scaffold_81000012
C2H2 ZF
60
82
YRCKECSKQFSRQNILKAHMRTH
fgenesh2_pm.scaffold_81000012
C2H2 ZF
88
110
YACDECSKQFRNLGNLERHIRTH
fgenesh2_pm.scaffold_81000012
C2H2 ZF
116
138
YKCEECGRQFSEIGSLKNHMRTH
fgenesh2_pm.scaffold_81000012
C2H2 ZF
144
166
YRCEECGKQFRQLGNLKTHILIH
fgenesh2_pm.scaffold_81000012
C2H2 ZF
172
194
YKCEKCSKHFSQQSILKAHMRTH
fgenesh2_pm.scaffold_81000012
C2H2 ZF
200
222
YRCEKCSRQFSQLGNLQIHMRTH
fgenesh2_pm.scaffold_81000012
C2H2 ZF
228
250
YRCEECSKQFSRLDILEKHMRTH
fgenesh2_pm.scaffold_81000012
C2H2 ZF
256
278
YKCEECSKQFSERGSLRMHMRTH
fgenesh2_pm.scaffold_81000012
C2H2 ZF
284
306
YKCEECSKQFGQLGDLKVHIRTH
fgenesh2_pm.scaffold_81000012
C2H2 ZF
312
335
YRCEECSKQFSQLGSLKKHKRTQH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found