CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_83000015
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_83000015
T139865_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_83000015
C2H2 ZF
1
22
MCEKCGKQFSALDHLKLHMQTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
28
50
YKCEECNKKFSQLGNLKTHMRIH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
56
78
FKCEECSKQFRQTGALKNHMKTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
84
106
FKCEECSKQFSERATLKTHVRTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
112
134
YKCKECSRQFSEPGSLKSHMRTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
140
162
YRCEECSKQFSQPSDLKKHMRTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
168
190
YKCEECSKQFSILHHLKTHMRTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
196
218
YKCEECSKQFSMPGNLKSHMYTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
224
246
FKCEECSKQFSQLSDLKKHMRIH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
252
274
FKCEECSKQFSRPGHLKIHLRIH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
280
302
YKCEECSKQFSQSGSLKTHMRTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
308
330
FNCEECSRQFGRLDCLMAHIRTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
336
358
FKCDKCGMQFRKLGHLGTHMRTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
364
386
YRCEECSRQFSELGSLKSHMRSH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
392
414
YTCEECSKQFSELSHLKTHMRTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
420
442
YRCEECSRQFSTMNGLKEHMRTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
448
470
YCCEECSKQFRCLGDLKKHMRTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
476
498
YKCEECSKQFRHLCSLKEHMRTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
504
525
YTCEVCSKKFSSLSNMKSHQRN
fgenesh2_pm.scaffold_83000015
C2H2 ZF
541
563
FLCEECSRQFSQLSHLKIHMRTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
569
591
YKCEECSKQFRMLHHLKTHMHTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
597
619
YQCEECNKQFTMPSHLKTHMRTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
625
647
YKCEECSKQFSRPEHLKTHMRTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
653
675
YKCEECSKQFSQPGSLKIHMRTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
681
703
FKCEECSKQFGRVDCLMAHKRTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
709
731
FQCERCGMRFRRLGHLGTHMHTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
737
759
YGCEECSRQFSALDQLKIHMRTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
765
787
YMCEECSKRFVAQGDLKKHMRTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
793
815
YKCEECSRQFSMPGSLKRHMQTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
821
843
YMCGECSKRFSVLADLKKHMRTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
849
871
YKCEECSKQFSSLYGLKCHMRTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
877
899
YKCEECSKQFSQLSAHKKHMRIH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
905
927
FTCEECSRQFSERGSLKKHMRTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
933
955
YMCGECSKRFSVLGDLKTHMRTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
961
983
YKCAECSKQFSQRSALKTHMVTH
fgenesh2_pm.scaffold_83000015
C2H2 ZF
989
1011
YTCEECSRQFGHKCALKKHKRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found