CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_84000019
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_84000019
T139866_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_84000019
C2H2 ZF
10
32
YRCEKCGRQFSELYALKSHVRTH
fgenesh2_pm.scaffold_84000019
C2H2 ZF
38
60
YRCEECNGRFRRMDHLKTHKRTH
fgenesh2_pm.scaffold_84000019
C2H2 ZF
66
88
YKCEACGKQFSTLSAMKTHMRTH
fgenesh2_pm.scaffold_84000019
C2H2 ZF
94
116
YRCEGCSRQFSELGHLKSHMRTH
fgenesh2_pm.scaffold_84000019
C2H2 ZF
122
144
FRCEECSRQFSQPGSLKTHMRSH
fgenesh2_pm.scaffold_84000019
C2H2 ZF
160
182
YRCEECDWQFGRLGDLKRRVRTH
fgenesh2_pm.scaffold_84000019
C2H2 ZF
187
208
YRCEACGKQFRQFQHLKRHVRT
fgenesh2_pm.scaffold_84000019
C2H2 ZF
215
237
YMCEKCGIQFNEPRNLKTHIRTH
fgenesh2_pm.scaffold_84000019
C2H2 ZF
243
265
YMCEACGRQFSRLSTLKSHMRTH
fgenesh2_pm.scaffold_84000019
C2H2 ZF
271
293
YKCEECSRQFSQLGALKSHIRTH
fgenesh2_pm.scaffold_84000019
C2H2 ZF
299
321
YRCEACSKKFNHLGNLKTHIRTH
fgenesh2_pm.scaffold_84000019
C2H2 ZF
327
349
YKCEQCSRQFSRIDHLNFHLRTH
fgenesh2_pm.scaffold_84000019
C2H2 ZF
354
376
YRCEVCSMQFSRLSYRKRHMLTH
fgenesh2_pm.scaffold_84000019
C2H2 ZF
382
404
HRCEACGHQFSRMRDLKTHMRTH
fgenesh2_pm.scaffold_84000019
C2H2 ZF
410
432
YGCGACGKQFTRLNGLTTHMRTH
fgenesh2_pm.scaffold_84000019
C2H2 ZF
438
460
FGCEECSRQFRQLSHLKTHIRTH
fgenesh2_pm.scaffold_84000019
C2H2 ZF
466
488
YGCGACGRQFTRMNSLKSHMRTH
fgenesh2_pm.scaffold_84000019
C2H2 ZF
494
516
YTCEECSRPFGELGHLKTHMLTH
fgenesh2_pm.scaffold_84000019
C2H2 ZF
522
544
YGCGSCGRQFTRLYDLKTHMRTH
fgenesh2_pm.scaffold_84000019
C2H2 ZF
550
572
YKCEACGHQFSSMRDLKRHMRTH
fgenesh2_pm.scaffold_84000019
C2H2 ZF
578
600
YGCGACGRQFTRLYRLKTHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found