CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pm.scaffold_843000002
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_843000002
T139867_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_843000002
C2H2 ZF
1
22
MCGECGYRTDRKCHLSQHMRIH
fgenesh2_pm.scaffold_843000002
C2H2 ZF
28
50
YKCDQCDYSAPQRSKLDRHLRKH
fgenesh2_pm.scaffold_843000002
C2H2 ZF
56
78
YMCGECGYRTAHKHHLSGHSRTH
fgenesh2_pm.scaffold_843000002
C2H2 ZF
84
106
YMCDQCGFRTTRKSILSAHVRIH
fgenesh2_pm.scaffold_843000002
C2H2 ZF
112
134
YQCDQCDYSAAHKCSLDQHLAIH
fgenesh2_pm.scaffold_843000002
C2H2 ZF
140
162
YMCGECGYRAGNKSHLSRHMRTH
fgenesh2_pm.scaffold_843000002
C2H2 ZF
168
190
YKCDQCDYAAAEKQYLIDHQSKH
fgenesh2_pm.scaffold_843000002
C2H2 ZF
196
218
YMCGECGYRAAQRSTLARHMRTH
fgenesh2_pm.scaffold_843000002
C2H2 ZF
224
246
YKCDQCDYSTGRKFTLSQHLRTH
fgenesh2_pm.scaffold_843000002
C2H2 ZF
252
274
YNCNQCDYSAAHKSSFNLHARKH
fgenesh2_pm.scaffold_843000002
C2H2 ZF
276
296
KAECGYRAVQKSELIKHMRIH
fgenesh2_pm.scaffold_843000002
C2H2 ZF
302
324
YKCDQCDYSAARRSALEEHQAKH
fgenesh2_pm.scaffold_843000002
C2H2 ZF
330
352
YMCGECGYRTAKKSNLSRHTRTH
fgenesh2_pm.scaffold_843000002
C2H2 ZF
358
380
YKCDQCDYSAARKSCLDVHLQIH
fgenesh2_pm.scaffold_843000002
C2H2 ZF
386
408
YMCGECGYRTAHQSHLFRHMRTH
fgenesh2_pm.scaffold_843000002
C2H2 ZF
414
436
YKCCNCDYSAADKSTLDQHVAKH
fgenesh2_pm.scaffold_843000002
C2H2 ZF
442
464
YMCGECGYRTAQKCNLSTHMRTH
fgenesh2_pm.scaffold_843000002
C2H2 ZF
470
492
YKCNQCDYAAARKSTLDIHLAKH
fgenesh2_pm.scaffold_843000002
C2H2 ZF
498
520
YMCGECGYRAAQRSNLSRHMKTH
fgenesh2_pm.scaffold_843000002
C2H2 ZF
526
548
YKCDQCDYSVAQKSTLNKHVRRH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found