CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pm.scaffold_94000014
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pm.scaffold_94000014
T139877_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pm.scaffold_94000014
C2H2 ZF
1
22
MCGECGYRTAQKSTLFTHMRIH
fgenesh2_pm.scaffold_94000014
C2H2 ZF
28
50
FKCDQCDYAAAKKSTLESHLAMH
fgenesh2_pm.scaffold_94000014
C2H2 ZF
68
90
YVCGECGYRAAQKFTLTEHLRTH
fgenesh2_pm.scaffold_94000014
C2H2 ZF
96
118
FKCDRCNYSAASKSTLDRHLTTH
fgenesh2_pm.scaffold_94000014
C2H2 ZF
124
146
FMCGECGKEFSQLGGLKTHTRTH
fgenesh2_pm.scaffold_94000014
C2H2 ZF
152
174
YRCEECSKEFSQLGALKKHMRTH
fgenesh2_pm.scaffold_94000014
C2H2 ZF
180
202
HRCEECSRQFSELGHLMKHMRTH
fgenesh2_pm.scaffold_94000014
C2H2 ZF
208
230
YGCEECSRQFSQLGTLKSHMKTH
fgenesh2_pm.scaffold_94000014
C2H2 ZF
236
258
YRCEECSRQFGLRMSLKTHIKTH
fgenesh2_pm.scaffold_94000014
C2H2 ZF
288
310
YRCEECSRQFSKHSNLKTHMRTH
fgenesh2_pm.scaffold_94000014
C2H2 ZF
316
338
YRCEECTKQFSQVGDLKKHMRTH
fgenesh2_pm.scaffold_94000014
C2H2 ZF
344
366
YRCEECSRQFSQLVGLKKHMRTH
fgenesh2_pm.scaffold_94000014
C2H2 ZF
372
394
YRCEKCSMQCSHLSDLRKHMRTH
fgenesh2_pm.scaffold_94000014
C2H2 ZF
400
422
YKCENCGKQFGRMDVLKKHMRTH
fgenesh2_pm.scaffold_94000014
C2H2 ZF
428
450
YRCEECSRQFNQLATLKTHMRTH
fgenesh2_pm.scaffold_94000014
C2H2 ZF
456
478
YRCEECNRQFSQLGNLKTHMRTH
fgenesh2_pm.scaffold_94000014
C2H2 ZF
484
506
YTCEECSRQFSQLSHLKRHMETH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found