CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw.1.665.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gw.1.665.1
T140104_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw.1.665.1
C2H2 ZF
1
23
YTCKLCEFKTADKETLSEHKRTH
gw.1.665.1
C2H2 ZF
29
51
YLCGECGYRTAHSSSFTRHKRKH
gw.1.665.1
C2H2 ZF
57
79
FLCDECGYRTRESSALSTHKRTH
gw.1.665.1
C2H2 ZF
85
108
YKCDQCDFAAAQISHLKKHVRVKH
gw.1.665.1
C2H2 ZF
114
136
FVCNECGYWTADKTTLTNHMRTH
gw.1.665.1
C2H2 ZF
142
164
YKCDQCDYSASEKGHLSSHMRTH
gw.1.665.1
C2H2 ZF
170
193
YKCDQCDFSAAQSSLLTKHVRVKH
gw.1.665.1
C2H2 ZF
199
221
FMCNECEYWTDNRTNFLTHLRKH
gw.1.665.1
C2H2 ZF
258
280
YLCGDCGYRTAHRSSFTRHQRKH
gw.1.665.1
C2H2 ZF
286
308
YLCDECGYRARESSYLSIHKRTH
gw.1.665.1
C2H2 ZF
314
337
YKCDQCDYSAAQLPCLKNHVRRTH
gw.1.665.1
C2H2 ZF
343
365
YLCEECGFRTASQASLTKHKRKH
gw.1.665.1
C2H2 ZF
371
393
YLCNECGYRARESSSLSSHMRTH
gw.1.665.1
C2H2 ZF
399
422
YKCDQCDFSSAQSTSLKTHVRVKH
gw.1.665.1
C2H2 ZF
428
450
FVCNECEYWTDNRTTFLNHMRKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found