CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw.252.5.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gw.252.5.1
T140119_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw.252.5.1
C2H2 ZF
3
25
YLCEECNKRFGTLSKLKAHMRTH
gw.252.5.1
C2H2 ZF
31
53
YKCEECSKQFSQPGNLKTHMRTH
gw.252.5.1
C2H2 ZF
59
81
YKCEECSKQFSTPSHLKRHIRTH
gw.252.5.1
C2H2 ZF
87
109
FTCEECSKQFRELGNLKQHMRTH
gw.252.5.1
C2H2 ZF
115
137
YMCEECSKQFNLPSDLKKHMRTH
gw.252.5.1
C2H2 ZF
143
165
YKCEECSKQFSQPGSLRTHMRTH
gw.252.5.1
C2H2 ZF
171
193
FKCEECSRQFVRWYSLKAHIRTH
gw.252.5.1
C2H2 ZF
199
221
YKCEECSKQFSQQSHLKTHMRTH
gw.252.5.1
C2H2 ZF
227
249
YKCEECSRQFSERGSLKKHMRTH
gw.252.5.1
C2H2 ZF
255
277
FKCEECSKRFSVLADLKNHMRTH
gw.252.5.1
C2H2 ZF
283
305
YKCEECSKQFSQRSNLKTHMLTH
gw.252.5.1
C2H2 ZF
341
363
YKCEECGKQFRTPSHLKTHMRIH
gw.252.5.1
C2H2 ZF
369
391
YKCEECSKQFSTPGDLKTHVRTH
gw.252.5.1
C2H2 ZF
397
419
YKCDECSKQFSRPEHLKTHMRTH
gw.252.5.1
C2H2 ZF
425
447
YKCEECSKQFSQPGSLKTHMRTH
gw.252.5.1
C2H2 ZF
453
476
FKCEECSKQQFSALDQLKIHMRTH
gw.252.5.1
C2H2 ZF
482
504
YMCGECSKRFVGRGDLKKHMRIH
gw.252.5.1
C2H2 ZF
510
532
YKCEECSKQFSMAGSLKRHMQTH
gw.252.5.1
C2H2 ZF
538
560
YMCGECSKRFSVLADLKRHMRTH
gw.252.5.1
C2H2 ZF
566
588
YKCVECSKQFSSLFGLKCHTRTH
gw.252.5.1
C2H2 ZF
594
616
YKCEECNKQFSQLSVQKKHMRIH
gw.252.5.1
C2H2 ZF
622
644
FTCEECSRQFSERGSLKKHMRTH
gw.252.5.1
C2H2 ZF
650
672
YMCGECSKRFSVLGDLKTHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found