CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw.254.29.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gw.254.29.1
T140121_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw.254.29.1
C2H2 ZF
13
35
YKCDQCDFCTARKGDLDTHIAEH
gw.254.29.1
C2H2 ZF
41
63
YLCENCGYRTADKIQLSRHMRMH
gw.254.29.1
C2H2 ZF
98
120
YMCGKCGYRTDHFYVLSTHMKTH
gw.254.29.1
C2H2 ZF
126
148
FKCDQCAYCTSRKSALIQHMAMH
gw.254.29.1
C2H2 ZF
154
176
YMCGECGFRTGFKSALSKHMNKH
gw.254.29.1
C2H2 ZF
182
203
YKCDQFPQKCDYSTTSKGNLLV
gw.254.29.1
C2H2 ZF
216
238
YMCGECGYQAADKSSLSRHAKIH
gw.254.29.1
C2H2 ZF
244
266
YKCDQCDYCTAWKWDLEKHKVKH
gw.254.29.1
C2H2 ZF
272
294
YMCGECGFRTGYRSTLTSHMKKH
gw.254.29.1
C2H2 ZF
305
327
YMCGECGFRTDHKSTLSHHMKMH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found