CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw.300.16.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gw.300.16.1
T140140_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw.300.16.1
C2H2 ZF
1
23
YKCDQCDHSTSEKPNLNSHLATH
gw.300.16.1
C2H2 ZF
29
51
YMCGECGYRAVSRSYISQHMRTH
gw.300.16.1
C2H2 ZF
57
80
YKCDQCDYSATQKGNLSRHVQAQH
gw.300.16.1
C2H2 ZF
86
108
YMCEKCGYRTAQKSNLVQHMRTH
gw.300.16.1
C2H2 ZF
113
135
PYKCDKDLSTTQKSNLNSHIANH
gw.300.16.1
C2H2 ZF
141
163
YMCGECGFRTAHRSYISLHMRTH
gw.300.16.1
C2H2 ZF
169
192
YKCDQCDYSTAQKCNLSRHVKTNH
gw.300.16.1
C2H2 ZF
198
220
YMCGECGFRTTQKSNLVQHMRTH
gw.300.16.1
C2H2 ZF
226
249
YKCDQCDYSATQKSNLRNHIAAKH
gw.300.16.1
C2H2 ZF
255
275
YKCNKCDYSATQKGNLSKHVE
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found