CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw.308.146.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gw.308.146.1
T140142_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw.308.146.1
C2H2 ZF
11
33
YKCDKCDYSAAAKSTLDRHLAKH
gw.308.146.1
C2H2 ZF
39
61
YMCGECGYRATQKSHLSVHMRTH
gw.308.146.1
C2H2 ZF
67
89
YKCDQCDYSAAHKLSLDQHLARH
gw.308.146.1
C2H2 ZF
95
117
YMCGECGYRTAQKSDLSRHMRTH
gw.308.146.1
C2H2 ZF
123
145
YKCDQCDYSTARKSSLDRHLAKH
gw.308.146.1
C2H2 ZF
180
202
YLCEDCGYRTSRKDHLLQHMRIH
gw.308.146.1
C2H2 ZF
208
230
YKCDQCNYSATRKSTLNDHLLKH
gw.308.146.1
C2H2 ZF
236
258
YMCGECGYRTAERRYFYRHMKIH
gw.308.146.1
C2H2 ZF
264
286
YKCDQCDYSAGLKQLLDRHLAKH
gw.308.146.1
C2H2 ZF
292
314
FMCGECGYRTTQKSASSIHMRTH
gw.308.146.1
C2H2 ZF
320
338
YKCDQCNYSAARKSHLDIH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found